BLASTX nr result

ID: Atractylodes22_contig00055584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055584
         (198 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520572.1| pentatricopeptide repeat-containing protein,...    99   4e-19
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]    97   1e-18
ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi...    96   2e-18
ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containi...    96   2e-18
ref|XP_002308772.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18

>ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540232|gb|EEF41805.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/64 (70%), Positives = 57/64 (89%)
 Frame = -2

Query: 194 MILGYGQHGMGKKSLQLFYSMRDSGIQPDSVTIVAVLYACSYAGLVDEGLQLFESLEVEY 15
           MILGYGQHGMG+ +L LF+SM+ SGIQPD++T VAVL ACSYAGLVDEGL++FES++ ++
Sbjct: 479 MILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIFESMKRDF 538

Query: 14  KIVP 3
           KI P
Sbjct: 539 KIQP 542


>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/64 (70%), Positives = 56/64 (87%)
 Frame = -2

Query: 194 MILGYGQHGMGKKSLQLFYSMRDSGIQPDSVTIVAVLYACSYAGLVDEGLQLFESLEVEY 15
           MIL YGQHGMG+++L LF++M  SGI+PDSVT VA+L ACSYAGLVDEGL++F+S+E EY
Sbjct: 597 MILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREY 656

Query: 14  KIVP 3
           KI P
Sbjct: 657 KIQP 660


>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/64 (70%), Positives = 54/64 (84%)
 Frame = -2

Query: 194 MILGYGQHGMGKKSLQLFYSMRDSGIQPDSVTIVAVLYACSYAGLVDEGLQLFESLEVEY 15
           MILGYGQHGMG+ +L +F+ M+ SGIQPD+VT+VAVL ACSYAGLVDEGLQ+FES+   Y
Sbjct: 589 MILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVY 648

Query: 14  KIVP 3
            I P
Sbjct: 649 NIQP 652


>ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/64 (70%), Positives = 54/64 (84%)
 Frame = -2

Query: 194 MILGYGQHGMGKKSLQLFYSMRDSGIQPDSVTIVAVLYACSYAGLVDEGLQLFESLEVEY 15
           MILGYGQHGMG+ +L +F+ M+ SGIQPD+VT+VAVL ACSYAGLVDEGLQ+FES+   Y
Sbjct: 565 MILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVY 624

Query: 14  KIVP 3
            I P
Sbjct: 625 NIQP 628


>ref|XP_002308772.1| predicted protein [Populus trichocarpa] gi|222854748|gb|EEE92295.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 42/64 (65%), Positives = 57/64 (89%)
 Frame = -2

Query: 194 MILGYGQHGMGKKSLQLFYSMRDSGIQPDSVTIVAVLYACSYAGLVDEGLQLFESLEVEY 15
           MIL YGQHGMG+++L LF+SM+ SGI+PD++T +AVL ACS++GLVDEGLQ+FES+E ++
Sbjct: 102 MILAYGQHGMGERALSLFHSMKKSGIEPDAITFIAVLSACSHSGLVDEGLQIFESMEKDF 161

Query: 14  KIVP 3
           KI P
Sbjct: 162 KIQP 165


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