BLASTX nr result

ID: Atractylodes22_contig00055482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055482
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]    64   2e-20
emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]    64   1e-19
emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]    65   2e-19
gb|AAB82754.1| retrofit [Oryza longistaminata]                         60   8e-17
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]    58   8e-17

>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score = 64.3 bits (155), Expect(2) = 2e-20
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = +1

Query: 172 KLDFRSAKCVFIGYSHHHKGYKCLHPSGCVYISKSVTFDESNF 300
           KLDFRS+ C F+GYS  HKGYKCL+  G ++IS+SV FDE+ F
Sbjct: 558 KLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVVFDETRF 600



 Score = 59.3 bits (142), Expect(2) = 2e-20
 Identities = 28/50 (56%), Positives = 31/50 (62%)
 Frame = +2

Query: 11  TTATFLINHLVTPTLNNKSSINVLFNN*SNLKFLKVFGCTCFPHIREYNK 160
           +TA FLIN L T  L  K     LFN+  N   LKVFGC CFPH+R YNK
Sbjct: 507 STAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPYNK 556


>emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]
          Length = 1242

 Score = 63.9 bits (154), Expect(2) = 1e-19
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = +1

Query: 172 KLDFRSAKCVFIGYSHHHKGYKCLHPSGCVYISKSVTFDESNF 300
           KLDFRS+ C F+GYS  HKGYKCL+  G ++IS+SV FDE+ F
Sbjct: 804 KLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVXFDETKF 846



 Score = 57.4 bits (137), Expect(2) = 1e-19
 Identities = 27/50 (54%), Positives = 30/50 (60%)
 Frame = +2

Query: 11  TTATFLINHLVTPTLNNKSSINVLFNN*SNLKFLKVFGCTCFPHIREYNK 160
           +T  FLIN L T  L  K     LFN+  N   LKVFGC CFPH+R YNK
Sbjct: 753 STXVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPYNK 802


>emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]
          Length = 731

 Score = 64.7 bits (156), Expect(2) = 2e-19
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = +1

Query: 172 KLDFRSAKCVFIGYSHHHKGYKCLHPSGCVYISKSVTFDESNF 300
           KL FRS+KC+F+GYS  HKGY CLHP G +YIS++V F+E  F
Sbjct: 110 KLQFRSSKCLFLGYSSTHKGYLCLHPFGKIYISRNVIFNEHEF 152



 Score = 55.5 bits (132), Expect(2) = 2e-19
 Identities = 25/49 (51%), Positives = 32/49 (65%)
 Frame = +2

Query: 11  TTATFLINHLVTPTLNNKSSINVLFNN*SNLKFLKVFGCTCFPHIREYN 157
           +T+ +LIN L TP L++ S    LF    +  FLK FGCTCFPH+R YN
Sbjct: 59  STSVYLINKLPTPILSHDSPFQKLFGCTPDSHFLKTFGCTCFPHLRPYN 107


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score = 59.7 bits (143), Expect(2) = 8e-17
 Identities = 28/44 (63%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = +1

Query: 172 KLDFRSAKCVFIGYSHHHKGYKCLH-PSGCVYISKSVTFDESNF 300
           KL FRS +CVF+G+S HHKG+KCL   SG VYIS+ V FDE+ F
Sbjct: 697 KLQFRSKQCVFLGFSTHHKGFKCLDVSSGRVYISRDVVFDENVF 740



 Score = 52.0 bits (123), Expect(2) = 8e-17
 Identities = 21/47 (44%), Positives = 31/47 (65%)
 Frame = +2

Query: 17  ATFLINHLVTPTLNNKSSINVLFNN*SNLKFLKVFGCTCFPHIREYN 157
           AT+LIN + + T+ N + +  LFN   +   L+VFGC C+PH+R YN
Sbjct: 648 ATYLINRIPSKTIQNSTPLEKLFNQKPDYSSLRVFGCACWPHLRPYN 694


>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
          Length = 1365

 Score = 58.2 bits (139), Expect(2) = 8e-17
 Identities = 27/44 (61%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
 Frame = +1

Query: 172 KLDFRSAKCVFIGYSHHHKGYKCL-HPSGCVYISKSVTFDESNF 300
           KL +RS KCVF+GYS HHKGY CL + +G VY+S  V FDE+ F
Sbjct: 674 KLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDETQF 717



 Score = 53.5 bits (127), Expect(2) = 8e-17
 Identities = 25/48 (52%), Positives = 30/48 (62%)
 Frame = +2

Query: 14  TATFLINHLVTPTLNNKSSINVLFNN*SNLKFLKVFGCTCFPHIREYN 157
           TATFLIN + +  L N S    LF    + KFL+VFGC C+P IR YN
Sbjct: 624 TATFLINRMPSKVLQNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYN 671


Top