BLASTX nr result

ID: Atractylodes22_contig00055436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055436
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi...   152   4e-35
emb|CBI20738.3| unnamed protein product [Vitis vinifera]              152   4e-35
emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]   152   4e-35
ref|XP_002867196.1| pentatricopeptide repeat-containing protein ...   141   5e-32
ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containi...   140   8e-32

>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/84 (85%), Positives = 82/84 (97%)
 Frame = +1

Query: 1    IKLIKEDGYIPDTDYVLLDVEEEEKERSLYYHSEKLAIAFGLISTPSSTTIRVIKNLRVC 180
            +K I+EDGY+PDT++VLLDVE+EEKERSLYYHSEKLAIA+GLISTP+STTIRVIKNLRVC
Sbjct: 1481 MKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVC 1540

Query: 181  GDCHNAIKHISKVCQREIVLRDAN 252
            GDCHNAIK+ISKV +REIVLRDAN
Sbjct: 1541 GDCHNAIKYISKVFEREIVLRDAN 1564


>emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/84 (85%), Positives = 82/84 (97%)
 Frame = +1

Query: 1    IKLIKEDGYIPDTDYVLLDVEEEEKERSLYYHSEKLAIAFGLISTPSSTTIRVIKNLRVC 180
            +K I+EDGY+PDT++VLLDVE+EEKERSLYYHSEKLAIA+GLISTP+STTIRVIKNLRVC
Sbjct: 766  MKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVC 825

Query: 181  GDCHNAIKHISKVCQREIVLRDAN 252
            GDCHNAIK+ISKV +REIVLRDAN
Sbjct: 826  GDCHNAIKYISKVFEREIVLRDAN 849


>emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
          Length = 503

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/84 (85%), Positives = 82/84 (97%)
 Frame = +1

Query: 1   IKLIKEDGYIPDTDYVLLDVEEEEKERSLYYHSEKLAIAFGLISTPSSTTIRVIKNLRVC 180
           +K I+EDGY+PDT++VLLDVE+EEKERSLYYHSEKLAIA+GLISTP+STTIRVIKNLRVC
Sbjct: 404 MKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVC 463

Query: 181 GDCHNAIKHISKVCQREIVLRDAN 252
           GDCHNAIK+ISKV +REIVLRDAN
Sbjct: 464 GDCHNAIKYISKVFEREIVLRDAN 487


>ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297313032|gb|EFH43455.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 997

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/84 (78%), Positives = 78/84 (92%)
 Frame = +1

Query: 1    IKLIKEDGYIPDTDYVLLDVEEEEKERSLYYHSEKLAIAFGLISTPSSTTIRVIKNLRVC 180
            I+ IK++GY+P+TD+ L+DVEEEEKER+LYYHSEKLA+AFGL+STP ST IRVIKNLRVC
Sbjct: 898  IRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVC 957

Query: 181  GDCHNAIKHISKVCQREIVLRDAN 252
            GDCHNA+K+ISKV  REIVLRDAN
Sbjct: 958  GDCHNAMKYISKVYDREIVLRDAN 981


>ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  140 bits (354), Expect = 8e-32
 Identities = 65/84 (77%), Positives = 78/84 (92%)
 Frame = +1

Query: 1    IKLIKEDGYIPDTDYVLLDVEEEEKERSLYYHSEKLAIAFGLISTPSSTTIRVIKNLRVC 180
            +K I+E+GY+PDTD+ L+DVEEE+KE SLYYHSEKLAIA+GL+ TP STT+RVIKNLRVC
Sbjct: 1483 MKRIREEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVC 1542

Query: 181  GDCHNAIKHISKVCQREIVLRDAN 252
            GDCHNAIK+ISKV +RE+VLRDAN
Sbjct: 1543 GDCHNAIKYISKVFEREVVLRDAN 1566


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