BLASTX nr result

ID: Atractylodes22_contig00055431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055431
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333000.1| nbs-lrr resistance protein [Populus trichoca...    61   8e-08
ref|XP_003613323.1| NBS-LRR disease resistance-like protein [Med...    59   5e-07
ref|XP_002271203.1| PREDICTED: putative disease resistance prote...    58   9e-07
ref|XP_001774433.1| predicted protein [Physcomitrella patens sub...    57   2e-06
emb|CAN82122.1| hypothetical protein VITISV_009093 [Vitis vinifera]    57   2e-06

>ref|XP_002333000.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222834485|gb|EEE72962.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 963

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 5/125 (4%)
 Frame = -2

Query: 361  LVSLVIRSCENLESILS-IQGLTSLESLRISSCPSLLRIPDLHNQGRSLKDLRINHCNKI 185
            L  L I+ C+ L ++ S +Q  TSLE L I  C  L  IPD   + RSL  L +  C  +
Sbjct: 769  LKRLAIQRCQKLTALPSGLQSCTSLEHLCIRWCVELTSIPDELRELRSLLHLEVTKCPSL 828

Query: 184  TCLPK-GFDCLAFVNDVSLGPFSTELHSFPSLQGIEKLRNHLHSLQLHGCAHWE---LIP 17
               P+    CL  +  +++GPFS +L +FP L  I+    HL SL+    + W+    +P
Sbjct: 829  NYFPEDSLCCLTRLKQLTVGPFSEKLKTFPGLNSIQ----HLSSLEEVVISGWDKLTSLP 884

Query: 16   EEIKH 2
            +++++
Sbjct: 885  DQLQY 889



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 42/118 (35%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
 Frame = -2

Query: 361  LVSLVIRSCENLESILS-IQGLTSLESLRISSCPSLLRIPDLHNQGRSLKDLRINHCNKI 185
            L  L I  C  L  +       TSLE+LRI  CP+L  IP L N  +SLK L I  C K+
Sbjct: 722  LAQLEICFCGELSYLSDDFHSFTSLENLRIEVCPNLEAIPSLKNL-KSLKRLAIQRCQKL 780

Query: 184  TCLPKGFDCLAFVNDVSLGPFSTELHSFPSLQGIEKLRNHLHSLQLHGCAHWELIPEE 11
            T LP G      +  + +  +  EL S P    + +LR+ LH L++  C      PE+
Sbjct: 781  TALPSGLQSCTSLEHLCI-RWCVELTSIP--DELRELRSLLH-LEVTKCPSLNYFPED 834


>ref|XP_003613323.1| NBS-LRR disease resistance-like protein [Medicago truncatula]
            gi|355514658|gb|AES96281.1| NBS-LRR disease
            resistance-like protein [Medicago truncatula]
          Length = 1228

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
 Frame = -2

Query: 361  LVSLVIRSCENLESIL-SIQGLTSLESLRISSCPSLLRIPDLHNQGRSLKDLRINHCNKI 185
            L  LVI+SC  +E +  S+Q +TSL+SL +   P+L  IPD       L++L I+ C K+
Sbjct: 986  LEELVIQSCSEIEVLHESLQHMTSLQSLTLCDLPNLASIPDWLGNLSLLQELNISQCPKL 1045

Query: 184  TCLPKGFDCLAFVNDVSL 131
            TCLP    CL  +  +S+
Sbjct: 1046 TCLPMSIQCLTALKHLSI 1063


>ref|XP_002271203.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
            vinifera]
          Length = 1179

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
 Frame = -2

Query: 361  LVSLVIRSCENLESI--LSIQGLTSLESLRISSCPSLLRIPDLHNQGRSLKDLRINHCNK 188
            L+SL I  C +LES+    I  L SL++L +S+C +L+ +P+       L+ L I+ C+K
Sbjct: 971  LISLSIHGCHSLESLPEAGIGDLKSLQNLSLSNCENLMGLPETMQHLTGLQILSISSCSK 1030

Query: 187  ITCLPKGFDCLAFVNDVSLGPFSTELHSFPSLQGIEKLRNHLHSLQLHGCAHWELIPEE 11
            +  LP+    L  + ++ L      LH   S+  +  L+     L + GC H E+I EE
Sbjct: 1031 LDTLPEWLGNLVSLQELELWYCENLLHLPDSMVRLTALQ----FLSIWGCPHLEIIKEE 1085


>ref|XP_001774433.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162674285|gb|EDQ60796.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 513

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 21/139 (15%)
 Frame = -2

Query: 361 LVSLVIRSCENLESILS-IQGLTSLESLRISSCPSLLRIPDLHNQGRSLKDLRINHCNKI 185
           L+SL +  C NL S+ + +  LTSL SL I+ C SL  +P+      SL  L IN C+ +
Sbjct: 90  LISLDLSGCSNLTSLPNELDNLTSLTSLNINGCSSLTSLPNELGNLTSLTSLNINECSSL 149

Query: 184 TCLPKGFDCLAFVNDVSLGPFS------TELHSFPSLQGIE--------KLRNHLH---- 59
           T LP     L  +  + L   S       ELH+  SL  +          L N L     
Sbjct: 150 TSLPNELGNLTSLISLDLSGCSNLTSLLNELHNLASLTSLNLSGCPSLTSLPNELGNLTS 209

Query: 58  --SLQLHGCAHWELIPEEI 8
             SL L GC++   +P E+
Sbjct: 210 LISLDLSGCSNLTSLPNEL 228



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
 Frame = -2

Query: 361 LVSLVIRSCENLESILS-IQGLTSLESLRISSCPSLLRIPDLHNQGRSLKDLRINHCNKI 185
           L+SL +  C NL S+L+ +  L SL SL +S CPSL  +P+      SL  L ++ C+ +
Sbjct: 162 LISLDLSGCSNLTSLLNELHNLASLTSLNLSGCPSLTSLPNELGNLTSLISLDLSGCSNL 221

Query: 184 TCLPKGFDCLAFVNDVSLGPFSTELHSFPSLQGIEKLRNHLHSLQLHGCAHWELIPEEI 8
           T LP   D    +  +++   S+ L S P+  G       L S+ L  C++   +P E+
Sbjct: 222 TSLPNELDNFTSLTSLNINGCSS-LTSLPNELG---NLTSLTSINLSWCSNLTSLPNEL 276


>emb|CAN82122.1| hypothetical protein VITISV_009093 [Vitis vinifera]
          Length = 1697

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
 Frame = -2

Query: 361  LVSLVIRSCENLESI--LSIQGLTSLESLRISSCPSLLRIPDLHNQGRSLKDLRINHCNK 188
            L+SL I  C +LES+    I  L SL++L +S+C +L+ +P+       L+ L I+ C+K
Sbjct: 971  LISLSIHGCHSLESLPEAGIGDLKSLQNLSLSNCENLMGLPETMQLLTGLQILSISSCSK 1030

Query: 187  ITCLPKGFDCLAFVNDVSLGPFSTELHSFPSLQGIEKLRNHLHSLQLHGCAHWELIPEE 11
            +  LP+    L  + ++ L      LH   S+  +  L+     L + GC H E+I EE
Sbjct: 1031 LDTLPEWLGNLVSLQELELWYCENLLHLPDSMVRLTALQ----FLSIWGCPHLEIIKEE 1085


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