BLASTX nr result

ID: Atractylodes22_contig00055425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055425
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523094.1| gamma-tubulin complex component, putative [R...   103   1e-20
ref|XP_002270318.1| PREDICTED: gamma-tubulin complex component 4...   103   2e-20
emb|CAN68024.1| hypothetical protein VITISV_003625 [Vitis vinifera]   103   2e-20
ref|NP_190944.2| gamma-tubulin complex component 4-like protein ...   102   3e-20
ref|XP_002877940.1| tubulin family protein [Arabidopsis lyrata s...   102   3e-20

>ref|XP_002523094.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223537656|gb|EEF39279.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 756

 Score =  103 bits (258), Expect = 1e-20
 Identities = 52/69 (75%), Positives = 60/69 (86%), Gaps = 2/69 (2%)
 Frame = +3

Query: 66  GYTGDLIIDERERRQSIG--LSPDDSMSDQCTFKLAPDISFIQPEERDIIENIITLGFYY 239
           GYTGDLIIDER  ++SIG  LSPD S+SD+ +FKLAPDISFI P +RD+IE IITLGFYY
Sbjct: 11  GYTGDLIIDERGHQKSIGVHLSPDASISDERSFKLAPDISFIDPSDRDLIERIITLGFYY 70

Query: 240 RELDRFATQ 266
           RELDRFAT+
Sbjct: 71  RELDRFATK 79


>ref|XP_002270318.1| PREDICTED: gamma-tubulin complex component 4 homolog [Vitis
           vinifera] gi|297743902|emb|CBI36872.3| unnamed protein
           product [Vitis vinifera]
          Length = 743

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/69 (72%), Positives = 59/69 (85%), Gaps = 2/69 (2%)
 Frame = +3

Query: 66  GYTGDLIIDERERRQSIG--LSPDDSMSDQCTFKLAPDISFIQPEERDIIENIITLGFYY 239
           GYTGDLIIDERE+ +S+G  LSPD  +S+  TFKLAPD+SFI P ERD+IE +ITLGFYY
Sbjct: 11  GYTGDLIIDEREQHKSLGINLSPDAPVSEDRTFKLAPDLSFIHPSERDLIEKVITLGFYY 70

Query: 240 RELDRFATQ 266
           RELDRFAT+
Sbjct: 71  RELDRFATK 79


>emb|CAN68024.1| hypothetical protein VITISV_003625 [Vitis vinifera]
          Length = 1529

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/69 (72%), Positives = 59/69 (85%), Gaps = 2/69 (2%)
 Frame = +3

Query: 66   GYTGDLIIDERERRQSIG--LSPDDSMSDQCTFKLAPDISFIQPEERDIIENIITLGFYY 239
            GYTGDLIIDERE+ +S+G  LSPD  +S+  TFKLAPD+SFI P ERD+IE +ITLGFYY
Sbjct: 850  GYTGDLIIDEREQHKSLGINLSPDAPVSEDRTFKLAPDLSFIHPSERDLIEKVITLGFYY 909

Query: 240  RELDRFATQ 266
            RELDRFAT+
Sbjct: 910  RELDRFATK 918


>ref|NP_190944.2| gamma-tubulin complex component 4-like protein [Arabidopsis
           thaliana] gi|83302875|sp|Q9M350.2|GCP4_ARATH RecName:
           Full=Gamma-tubulin complex component 4 homolog
           gi|45773820|gb|AAS76714.1| At3g53760 [Arabidopsis
           thaliana] gi|46402452|gb|AAS92328.1| At3g53760
           [Arabidopsis thaliana] gi|332645618|gb|AEE79139.1|
           gamma-tubulin complex component 4-like protein
           [Arabidopsis thaliana]
          Length = 745

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/67 (70%), Positives = 59/67 (88%), Gaps = 2/67 (2%)
 Frame = +3

Query: 66  GYTGDLIIDERERRQSIGLS--PDDSMSDQCTFKLAPDISFIQPEERDIIENIITLGFYY 239
           G+TGDLI+DERE+R+++GL+   D  +SD+CTFKLAPDISFI+P ERD+IE +I LGFYY
Sbjct: 11  GFTGDLIVDEREQRKTLGLAFNSDSPLSDECTFKLAPDISFIEPSERDLIERLIKLGFYY 70

Query: 240 RELDRFA 260
           RELDRFA
Sbjct: 71  RELDRFA 77


>ref|XP_002877940.1| tubulin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323778|gb|EFH54199.1| tubulin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 745

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/67 (70%), Positives = 59/67 (88%), Gaps = 2/67 (2%)
 Frame = +3

Query: 66  GYTGDLIIDERERRQSIGLS--PDDSMSDQCTFKLAPDISFIQPEERDIIENIITLGFYY 239
           G+TGDLI+DERE+R+++GL+   D  +SD+CTFKLAPDISFI+P ERD+IE +I LGFYY
Sbjct: 11  GFTGDLIVDEREQRKTLGLAFNSDSPLSDECTFKLAPDISFIEPSERDLIERLIKLGFYY 70

Query: 240 RELDRFA 260
           RELDRFA
Sbjct: 71  RELDRFA 77


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