BLASTX nr result

ID: Atractylodes22_contig00055366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055366
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
gb|AAT08686.1| karyopherin alpha [Hyacinthus orientalis]               57   2e-06
gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum]            57   2e-06
ref|XP_004144743.1| PREDICTED: importin subunit alpha-1-like [Cu...    57   2e-06
ref|XP_004150082.1| PREDICTED: importin subunit alpha-1-like [Cu...    56   3e-06

>ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|222857854|gb|EEE95401.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/78 (41%), Positives = 45/78 (57%)
 Frame = -2

Query: 234 PDLGDNIFLGIVGENTCKDDSSDVVKIEFQRVWAMTKVAYWTFEHTTGELDQGAVPIFVI 55
           P + D I  G+V          D+ +++F+  WA+T VA  T EHT   +D GAVP+FV 
Sbjct: 111 PPIDDVIKAGVVPRFVEFLGRHDLPQLQFEAAWALTNVASGTSEHTRVVIDHGAVPMFVQ 170

Query: 54  LLALASNDVWEKTVGTLG 1
           LL+  S+DV E+ V  LG
Sbjct: 171 LLSSGSDDVREQAVWALG 188


>gb|AAT08686.1| karyopherin alpha [Hyacinthus orientalis]
          Length = 277

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
 Frame = -2

Query: 240 DKPDLGDNIFLGIVG---ENTCKDDSSDVVKIEFQRVWAMTKVAYWTFEHTTGELDQGAV 70
           + P + + I  G+V    E   +DD SD   ++F+  WA+T +A  T EHT   +D GAV
Sbjct: 115 NSPPIEEVIESGVVPRFVEFLARDDFSD---LQFEAAWALTNIASGTSEHTKVVIDHGAV 171

Query: 69  PIFVILLALASNDVWEKTVGTLG 1
           P+FV LL   S+DV E+ V  LG
Sbjct: 172 PVFVRLLGSPSDDVREQAVWALG 194


>gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum]
          Length = 535

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/56 (50%), Positives = 39/56 (69%)
 Frame = -2

Query: 168 DVVKIEFQRVWAMTKVAYWTFEHTTGELDQGAVPIFVILLALASNDVWEKTVGTLG 1
           D+ +++F+  WA+T VA  T EHT   +D GAVP+FV LL+ AS+DV E+ V  LG
Sbjct: 132 DLPQLQFEAAWALTNVASGTSEHTRVVIDHGAVPMFVQLLSSASDDVREQAVWALG 187


>ref|XP_004144743.1| PREDICTED: importin subunit alpha-1-like [Cucumis sativus]
           gi|449490806|ref|XP_004158712.1| PREDICTED: importin
           subunit alpha-1-like [Cucumis sativus]
          Length = 537

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/78 (39%), Positives = 46/78 (58%)
 Frame = -2

Query: 234 PDLGDNIFLGIVGENTCKDDSSDVVKIEFQRVWAMTKVAYWTFEHTTGELDQGAVPIFVI 55
           P + + I  G+V +        D+ +++F+  WA+T +A  T EHT   +D GAVPIFV 
Sbjct: 109 PPIDEVIKAGVVPKFVEFLGRHDLPQLQFEAAWALTNIASGTSEHTRVVIDHGAVPIFVQ 168

Query: 54  LLALASNDVWEKTVGTLG 1
           LL+  S+DV E+ V  LG
Sbjct: 169 LLSSGSDDVREQAVWALG 186


>ref|XP_004150082.1| PREDICTED: importin subunit alpha-1-like [Cucumis sativus]
           gi|449501502|ref|XP_004161385.1| PREDICTED: importin
           subunit alpha-1-like [Cucumis sativus]
          Length = 530

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/56 (50%), Positives = 37/56 (66%)
 Frame = -2

Query: 168 DVVKIEFQRVWAMTKVAYWTFEHTTGELDQGAVPIFVILLALASNDVWEKTVGTLG 1
           D  +++F+  WA+T +A  T EHT   +D GAVPIFV LLA  S+DV E+ V  LG
Sbjct: 128 DFPQLQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVKLLASPSDDVREQAVWALG 183


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