BLASTX nr result

ID: Atractylodes22_contig00055280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055280
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    77   2e-12
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    68   7e-10
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    67   1e-09
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    66   3e-09
gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncat...    59   5e-07

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 30/65 (46%), Positives = 48/65 (73%)
 Frame = +3

Query: 117 EERRSADRNRGVKHIPYAELMDRKAKGLCFRCGDRYHPLHQCSDRQLRGIILGDDETLDA 296
           ++++S  R+R   H+ Y ELM+RK KGLCF+CG  +HP+HQC D+QLR ++L +DE  + 
Sbjct: 85  DKKKSGPRDRSFTHLSYNELMERKQKGLCFKCGGPFHPMHQCPDKQLRVLVLEEDEEGEP 144

Query: 297 TGEVM 311
            G+++
Sbjct: 145 EGKLL 149


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
 Frame = +3

Query: 132 ADRNRGVKHIPYAELMDRKAKGLCFRCGDRYHP-LHQCSDRQLRGIILGDDETLDATGEV 308
           +++ +GV+ I   E+ +R+AKGLCF+CG +YHP LH+C +R LR +ILG+ E L+  GE+
Sbjct: 293 SEKWKGVRSIRNNEMAERRAKGLCFKCGGKYHPTLHKCPERALRVLILGEGEALNDEGEI 352

Query: 309 M 311
           M
Sbjct: 353 M 353


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
 Frame = +3

Query: 129 SADRNRGVKHIPYAELMDRKAKGLCFRCGDRYHP-LHQCSDRQLRGIILGDDETLDATGE 305
           + DR +G++ I   E  +R+AKGLCF+CG +YHP  H+C +R LR +ILG+ ET+   GE
Sbjct: 308 TTDRWKGIRSIHNEEFEERRAKGLCFKCGGKYHPTFHKCLERALRVLILGEGETMTKEGE 367

Query: 306 VM 311
           ++
Sbjct: 368 IV 369


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/60 (46%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
 Frame = +3

Query: 135  DRNRGVKHIPYAELMDRKAKGLCFRCGDRYHP-LHQCSDRQLRGIILGDDETLDATGEVM 311
            +R +GV+ I   E+ +R+AKGLCF+CG +YHP LH+C ++ LR +ILG+ E ++  GE++
Sbjct: 919  ERWKGVRSIQNGEMAERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEIV 978


>gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 23/48 (47%), Positives = 33/48 (68%)
 Frame = +3

Query: 138 RNRGVKHIPYAELMDRKAKGLCFRCGDRYHPLHQCSDRQLRGIILGDD 281
           R++ V+ +   E+ DR+ KGLCF+CG  YHP HQC D+ L  ++L DD
Sbjct: 43  RDKNVRSLSSQEIADRRQKGLCFKCGGPYHPRHQCPDKNLSVMVLEDD 90


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