BLASTX nr result

ID: Atractylodes22_contig00055277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055277
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39619.3| unnamed protein product [Vitis vinifera]              221   4e-56
ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi...   221   4e-56
ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containi...   216   2e-54
ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containi...   207   9e-52
ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containi...   207   9e-52

>emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  221 bits (564), Expect = 4e-56
 Identities = 104/122 (85%), Positives = 111/122 (90%)
 Frame = +2

Query: 2   INTHNIEPNIKHYGCMVDLLGRAGLLKEAEKLIDSMPMAPDVATWGALLGACKKHGANEM 181
           I  H IEPN+KHYGCMVDLLGRAGLL EAEKLI+SMPMAPDVATWGALLGACKKHG  EM
Sbjct: 396 IEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEM 455

Query: 182 GERVGRKLIELQPDHDGFHVLLSNIYASKGSWDNVAEIRGTMMQQGVVKMPGCSIIEANG 361
           GERVGRKLIELQPDHDGFHVLLSNI+ASKG W++V E+RG M QQGVVK PGCS+IEANG
Sbjct: 456 GERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANG 515

Query: 362 VV 367
           VV
Sbjct: 516 VV 517


>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  221 bits (564), Expect = 4e-56
 Identities = 104/122 (85%), Positives = 111/122 (90%)
 Frame = +2

Query: 2   INTHNIEPNIKHYGCMVDLLGRAGLLKEAEKLIDSMPMAPDVATWGALLGACKKHGANEM 181
           I  H IEPN+KHYGCMVDLLGRAGLL EAEKLI+SMPMAPDVATWGALLGACKKHG  EM
Sbjct: 564 IEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEM 623

Query: 182 GERVGRKLIELQPDHDGFHVLLSNIYASKGSWDNVAEIRGTMMQQGVVKMPGCSIIEANG 361
           GERVGRKLIELQPDHDGFHVLLSNI+ASKG W++V E+RG M QQGVVK PGCS+IEANG
Sbjct: 624 GERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANG 683

Query: 362 VV 367
           VV
Sbjct: 684 VV 685


>ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  216 bits (550), Expect = 2e-54
 Identities = 103/122 (84%), Positives = 110/122 (90%)
 Frame = +2

Query: 2   INTHNIEPNIKHYGCMVDLLGRAGLLKEAEKLIDSMPMAPDVATWGALLGACKKHGANEM 181
           I+ H IE NIKHYGCMVDLLGRAGLLKEAE+LIDSMPMAPDVATWGALLGAC+KH  NEM
Sbjct: 531 IHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEM 590

Query: 182 GERVGRKLIELQPDHDGFHVLLSNIYASKGSWDNVAEIRGTMMQQGVVKMPGCSIIEANG 361
           GER+GRKLI+LQPDHDGFHVLLSNIYASKG+W NV EIRG M Q GVVK PGCS+IEANG
Sbjct: 591 GERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANG 650

Query: 362 VV 367
            V
Sbjct: 651 TV 652


>ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Cucumis sativus]
          Length = 953

 Score =  207 bits (526), Expect = 9e-52
 Identities = 95/122 (77%), Positives = 109/122 (89%)
 Frame = +2

Query: 2    INTHNIEPNIKHYGCMVDLLGRAGLLKEAEKLIDSMPMAPDVATWGALLGACKKHGANEM 181
            I+ H I+PN+KHYGCMVDLLGRAG L+EAE+L++ MPM PDVATWGALLGACKKHG +EM
Sbjct: 636  IHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEM 695

Query: 182  GERVGRKLIELQPDHDGFHVLLSNIYASKGSWDNVAEIRGTMMQQGVVKMPGCSIIEANG 361
            G RVGRKLIELQPDHDGFHVLLSNIYASKG WD+V EIRG M +  V+K+PGCS+IEANG
Sbjct: 696  GRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANG 755

Query: 362  VV 367
            V+
Sbjct: 756  VI 757


>ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  207 bits (526), Expect = 9e-52
 Identities = 95/122 (77%), Positives = 109/122 (89%)
 Frame = +2

Query: 2   INTHNIEPNIKHYGCMVDLLGRAGLLKEAEKLIDSMPMAPDVATWGALLGACKKHGANEM 181
           I+ H I+PN+KHYGCMVDLLGRAG L+EAE+L++ MPM PDVATWGALLGACKKHG +EM
Sbjct: 501 IHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEM 560

Query: 182 GERVGRKLIELQPDHDGFHVLLSNIYASKGSWDNVAEIRGTMMQQGVVKMPGCSIIEANG 361
           G RVGRKLIELQPDHDGFHVLLSNIYASKG WD+V EIRG M +  V+K+PGCS+IEANG
Sbjct: 561 GRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANG 620

Query: 362 VV 367
           V+
Sbjct: 621 VI 622


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