BLASTX nr result

ID: Atractylodes22_contig00055241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055241
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18125.3| unnamed protein product [Vitis vinifera]               62   4e-08
ref|XP_003632599.1| PREDICTED: DELLA protein RGA2-like [Vitis vi...    60   2e-07
emb|CAN77496.1| hypothetical protein VITISV_025266 [Vitis vinifera]    59   5e-07

>emb|CBI18125.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
 Frame = +2

Query: 17  SLVKNMMQPEVLQ------SFLQPDLDQAGVYGPKMGSYACDDHNVYCSITTPENSSMIS 178
           + +K M QPE  Q      + L   LDQ  +YG  +    C  +    SITT E+SS I 
Sbjct: 84  NFIKKMNQPEKFQPSWPFYNILDSTLDQVELYGFDIDEDVCG-YEFSSSITTTEDSSGIP 142

Query: 179 SDSYFRSIVSSEFSTISNLDDEMQVVFPSENSSQHVEGIEGISGTALEDVLRWWGENEEM 358
           S   F +++SSEF      D+ +Q  F   +   ++E  E I    + D   W   +EE 
Sbjct: 143 SAPDFPTVISSEFVGFPGCDEALQTSFLIGDLPLNMEEFETILCGEIGDAYGWLDGSEES 202

Query: 359 DNVFSGDSVDKEGVRSSPFMKSGDTSMVLPSMNLSMGFPPDDMEVEDQTSLSH 517
                  +  ++     P  KS +  +   S   S+ FP + +E+++Q S+ H
Sbjct: 203 FPSQQQSTEGEDEWSPCPSTKSSEALIDTTSTQQSLTFPAEGVEIDNQQSILH 255


>ref|XP_003632599.1| PREDICTED: DELLA protein RGA2-like [Vitis vinifera]
          Length = 490

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 7/169 (4%)
 Frame = +2

Query: 32  MMQPEVLQSFLQPD-------LDQAGVYGPKMGSYACDDHNVYCSITTPENSSMISSDSY 190
           MMQP+ L  F  P        LD+  VYG  + +   D  + +    T ++S  +    Y
Sbjct: 1   MMQPDELLQFSWPCFNDTVSCLDEIAVYGSGIDA---DMESGFSLFNTIKDSPDLEFIPY 57

Query: 191 FRSIVSSEFSTISNLDDEMQVVFPSENSSQHVEGIEGISGTALEDVLRWWGENEEMDNVF 370
             + +S E+       DE+Q   PS+ SS ++E  E I     ED+  W  E E+     
Sbjct: 58  SPTTLSDEYMGFPIHIDEVQHTLPSDVSSLNLEEFETILSNDTEDMFGWLEEREKSYPSK 117

Query: 371 SGDSVDKEGVRSSPFMKSGDTSMVLPSMNLSMGFPPDDMEVEDQTSLSH 517
                  +    SP MKS D S+ + S+   +  P +D+E+++Q S+ H
Sbjct: 118 QPSVEGDDNWSFSPSMKSADASVDMDSIEALLTLPTEDVEMDNQLSIVH 166


>emb|CAN77496.1| hypothetical protein VITISV_025266 [Vitis vinifera]
          Length = 535

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 47/169 (27%), Positives = 74/169 (43%), Gaps = 7/169 (4%)
 Frame = +2

Query: 32  MMQPEVLQSFLQPD-------LDQAGVYGPKMGSYACDDHNVYCSITTPENSSMISSDSY 190
           MMQP+ L  F  P        LD+  VYG  + +   D    +    T ++S  +    Y
Sbjct: 1   MMQPDELLQFSWPCFNDTVSCLDEIAVYGSGIDA---DMEPGFSLFNTIKDSXDLEFIPY 57

Query: 191 FRSIVSSEFSTISNLDDEMQVVFPSENSSQHVEGIEGISGTALEDVLRWWGENEEMDNVF 370
             + +S E+       DE+Q   PS+ SS ++E  E I     ED+  W  E E+     
Sbjct: 58  SPTTLSDEYMXFPIHIDEVQHTLPSDVSSLNLEEFETILSNDTEDMFGWLEEREKSYPSK 117

Query: 371 SGDSVDKEGVRSSPFMKSGDTSMVLPSMNLSMGFPPDDMEVEDQTSLSH 517
                  +    SP MKS D S  + S+   +  P +D+E+++Q S+ H
Sbjct: 118 QPSVEGDDNWSFSPSMKSADASXDMDSIEALLTLPTEDVEMDNQLSIVH 166


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