BLASTX nr result

ID: Atractylodes22_contig00055165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055165
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79493.1| hypothetical protein VITISV_033374 [Vitis vinifera]    89   4e-16
emb|CAN60437.1| hypothetical protein VITISV_035177 [Vitis vinifera]    87   1e-15
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    84   2e-14
ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210...    79   5e-13
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    76   3e-12

>emb|CAN79493.1| hypothetical protein VITISV_033374 [Vitis vinifera]
          Length = 455

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/99 (46%), Positives = 63/99 (63%), Gaps = 7/99 (7%)
 Frame = +2

Query: 2   SHSVSPH----IPPALTFDMEMIVEPSSVHGVRSVNSNHT---EVLIRWKGLSPFEDTWE 160
           +  +SPH     P     +ME++VEP+++ GVR  ++  T   EVL++WK L  FE TWE
Sbjct: 354 NEKLSPHYYGPFPIEARVEMELLVEPTAILGVRQHHTESTSVIEVLVQWKDLPDFEATWE 413

Query: 161 SFSDIQAQFPTFNLEDKVALWAAGNVRPHVVVTYARKKK 277
           SF+ IQ QFP F+L DKV +W  GN +P V  TYAR+ K
Sbjct: 414 SFATIQNQFPEFHLVDKVVVWEEGNDKPPVRFTYARRAK 452


>emb|CAN60437.1| hypothetical protein VITISV_035177 [Vitis vinifera]
          Length = 818

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/97 (46%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
 Frame = +2

Query: 2    SHSVSPHIPPALTFD--MEMIVEPSSVHGVRSVNSNHT---EVLIRWKGLSPFEDTWESF 166
            S ++ P  P   T    ME+++EP+++ GVR  ++  T   EVL++WK L  FE TWESF
Sbjct: 715  SSTIHPVFPCLATSQGKMELLIEPTAILGVRQRHTGSTPVTEVLVQWKDLPDFEATWESF 774

Query: 167  SDIQAQFPTFNLEDKVALWAAGNVRPHVVVTYARKKK 277
            + IQ QFP F+L ++VA+W  GN RP V  TYAR+ K
Sbjct: 775  AAIQNQFPEFHLANRVAVWEGGNYRPPVHFTYARRDK 811


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
 Frame = +2

Query: 11   VSPHIPPALTFDMEMIVEPSSVHGVRSVNSNH---TEVLIRWKGLSPFEDTWESFSDIQA 181
            V P IPP +  DME++VEP  +  VR +       TE LI+WKGL  FE TWE  S I  
Sbjct: 1524 VLPTIPPHIDVDMELVVEPEELLDVRQIRQGKQTFTECLIKWKGLPAFEATWEDMSPIHL 1583

Query: 182  QFPTFNLEDKVALWAAGNVRPHV----VVTYARK 271
            +FP+F+LEDKV +W AG V   +    ++TY R+
Sbjct: 1584 RFPSFHLEDKVNVWGAGIVMHQLKKPNLITYKRR 1617


>ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210176 [Cucumis sativus]
          Length = 1740

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
 Frame = +2

Query: 20  HIPPALTFDMEMIVEPSSVHGVR-SVNSNHTEVLIRWKGLSPFEDTWESFSDIQAQFPTF 196
           H+PPALT D E+ VE  +V GVR +      + L++WKGL   E TWES   +  Q+P+F
Sbjct: 628 HLPPALTEDFELQVESEAVLGVRWNSEMGANDWLVKWKGLHDSEATWESVYAMNQQYPSF 687

Query: 197 NLEDKVALWAAGNVRPHVVVTYARKKK 277
           +LEDKV+    G VRP ++ TY RK K
Sbjct: 688 HLEDKVSFELDGIVRPPIIHTYKRKGK 714


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
 Frame = +2

Query: 11   VSPHIPPALTFDMEMIVEPSSVHGVRSVNSNHT---EVLIRWKGLSPFEDTWESFSDIQA 181
            V P +PP LT D+ +   PS V G+R    N     E+L++W  +S  E TWE+  DI  
Sbjct: 1293 VFPVLPPLLTTDLVLPSSPSQVLGIRPNPLNQAAPAEILVQWSDMSADEATWENVQDIHE 1352

Query: 182  QFPTFNLEDKVALWAAGNVR----PHVVVTYARKKK 277
            +FPTF+LEDKV  WA G  R    P ++ TY+R+ +
Sbjct: 1353 RFPTFHLEDKVLNWAGGIARPAQNPPIIHTYSRRPR 1388


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