BLASTX nr result

ID: Atractylodes22_contig00055120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055120
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    73   3e-11
emb|CAN72562.1| hypothetical protein VITISV_032210 [Vitis vinifera]    67   2e-09
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]       66   3e-09
emb|CAE05537.2| OSJNBa0053B21.11 [Oryza sativa Japonica Group]         66   3e-09
gb|ABF98227.1| retrotransposon protein, putative, unclassified [...    66   3e-09

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 31/52 (59%), Positives = 43/52 (82%)
 Frame = -2

Query: 232  RFYGPF*VLERLGKVAYRLRLPTSTRIHPVFHVSQLRRAIGDCLSSASIPQQ 77
            RFYGPF VL+R+G+VAY+L+LP   ++HPVFH+SQL++A+G   SS +IP Q
Sbjct: 1413 RFYGPFSVLKRIGQVAYQLQLPLGAKLHPVFHISQLKKAVGSLQSSPTIPPQ 1464


>emb|CAN72562.1| hypothetical protein VITISV_032210 [Vitis vinifera]
          Length = 1003

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 29/51 (56%), Positives = 40/51 (78%)
 Frame = -2

Query: 229 FYGPF*VLERLGKVAYRLRLPTSTRIHPVFHVSQLRRAIGDCLSSASIPQQ 77
           +YGPF +  R+G VAYRL LP S+ IHP+FH+SQLR+A+G   +S+S+P Q
Sbjct: 686 YYGPFPIEARVGMVAYRLTLPPSSTIHPMFHISQLRKAVGTAPTSSSLPSQ 736


>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/52 (59%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = -2

Query: 232  RFYGPF*VLERLGKVAYRLRLPTSTRIHPVFHVSQLRRAIG-DCLSSASIPQ 80
            +F+GPF + +RLG VAYRL LP S+ IHP+FHVSQL+R IG D  +S  +PQ
Sbjct: 1432 KFFGPFQITDRLGSVAYRLALPASSSIHPIFHVSQLKRVIGRDQRASPQLPQ 1483


>emb|CAE05537.2| OSJNBa0053B21.11 [Oryza sativa Japonica Group]
          Length = 1251

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/42 (66%), Positives = 36/42 (85%)
 Frame = -2

Query: 235  ARFYGPF*VLERLGKVAYRLRLPTSTRIHPVFHVSQLRRAIG 110
            A+FYGPF VLE++GKVAY+L+LP    IHPVFHVSQL++ +G
Sbjct: 1174 AKFYGPFRVLEKIGKVAYKLQLPEEANIHPVFHVSQLKKHVG 1215


>gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1160

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/42 (66%), Positives = 36/42 (85%)
 Frame = -2

Query: 235  ARFYGPF*VLERLGKVAYRLRLPTSTRIHPVFHVSQLRRAIG 110
            A+FYGPF VLE++GKVAY+L+LP    IHPVFHVSQL++ +G
Sbjct: 1049 AKFYGPFRVLEKIGKVAYKLQLPEEANIHPVFHVSQLKKHVG 1090


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