BLASTX nr result

ID: Atractylodes22_contig00055097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055097
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]   116   2e-24
ref|XP_002516609.1| pentatricopeptide repeat-containing protein,...    96   3e-18
ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat...    74   1e-11
emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]    74   1e-11

>ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 629

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/105 (53%), Positives = 75/105 (71%)
 Frame = -2

Query: 316 FECVEWSGKWPDLVSLNTILSAACKTGDSVKVQMVLDLMEDEGIKLNVVGFTCVMQYFCN 137
           F+  EW+   PD+VS NTILSAACK G+S  ++ VL  ME EG+KLNVV  TC++QYFC 
Sbjct: 348 FDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCA 407

Query: 136 VGNINDCLKLFEHMICYGPRPSMVTINTLMVGLCKNRELGAAYKV 2
           +G I++CL+L E MI  G  P++VT N L+  LCKN  LG A+++
Sbjct: 408 IGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRI 452


>emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
          Length = 722

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/105 (53%), Positives = 75/105 (71%)
 Frame = -2

Query: 316 FECVEWSGKWPDLVSLNTILSAACKTGDSVKVQMVLDLMEDEGIKLNVVGFTCVMQYFCN 137
           F+  EW+   PD+VS NTILSAACK G+S  ++ VL  ME EG+KLNVV  TC++QYFC 
Sbjct: 456 FDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCA 515

Query: 136 VGNINDCLKLFEHMICYGPRPSMVTINTLMVGLCKNRELGAAYKV 2
           +G I++CL+L E MI  G  P++VT N L+  LCKN  LG A+++
Sbjct: 516 IGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRI 560


>ref|XP_002516609.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544429|gb|EEF45950.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 463

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/101 (45%), Positives = 66/101 (65%)
 Frame = -2

Query: 304 EWSGKWPDLVSLNTILSAACKTGDSVKVQMVLDLMEDEGIKLNVVGFTCVMQYFCNVGNI 125
           +W    PD+VS NTIL  ACK G+SV +Q +L  ME EGIK ++V  T ++QY C VG  
Sbjct: 351 KWGTNGPDVVSFNTILFMACKQGNSVMIQKILHRMEYEGIKPDIVSSTFLIQYLCRVGKF 410

Query: 124 NDCLKLFEHMICYGPRPSMVTINTLMVGLCKNRELGAAYKV 2
           ++CLKL + M+  G  P+ +TIN ++  LCKN  +G A ++
Sbjct: 411 SECLKLLDAMMHNGTGPTKITINMVLNKLCKNGLVGIALQI 451


>ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 33/92 (35%), Positives = 57/92 (61%)
 Frame = -2

Query: 286 PDLVSLNTILSAACKTGDSVKVQMVLDLMEDEGIKLNVVGFTCVMQYFCNVGNINDCLKL 107
           PD+VS NT++ A CK G   +   V+D M   G++ NVV +T +M   C +  +++ +K+
Sbjct: 269 PDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKV 328

Query: 106 FEHMICYGPRPSMVTINTLMVGLCKNRELGAA 11
           F+ M+C G  P++++ NTL+ G CK + +  A
Sbjct: 329 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKA 360


>emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 33/92 (35%), Positives = 57/92 (61%)
 Frame = -2

Query: 286 PDLVSLNTILSAACKTGDSVKVQMVLDLMEDEGIKLNVVGFTCVMQYFCNVGNINDCLKL 107
           PD+VS NT++ A CK G   +   V+D M   G++ NVV +T +M   C +  +++ +K+
Sbjct: 269 PDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKV 328

Query: 106 FEHMICYGPRPSMVTINTLMVGLCKNRELGAA 11
           F+ M+C G  P++++ NTL+ G CK + +  A
Sbjct: 329 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKA 360


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