BLASTX nr result

ID: Atractylodes22_contig00055022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055022
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   167   6e-40
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   159   2e-37
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   157   9e-37
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...   151   5e-35
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g...   142   3e-32

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  167 bits (424), Expect = 6e-40
 Identities = 73/108 (67%), Positives = 90/108 (83%)
 Frame = +3

Query: 3    LIPKLLHEYHDAAIGGHSGEVKTYQRLAEEWFWVGMKRSVTNYVRDCQVCQQQKTASTHP 182
            +IPKLL+EYHDA +GGH+GE+KTY RLA EW+W GM++ V  YV  C +CQQQK +  HP
Sbjct: 1169 IIPKLLYEYHDAPMGGHAGELKTYLRLAAEWYWRGMRQEVARYVHQCLICQQQKVSQQHP 1228

Query: 183  AGLLQPLPIPTQVWSEITMDFVEGLPRSHGVDSILVVVDRLTKYAHFL 326
             GLLQPLPIP+ VW +I+MDF+EGLP S GVD+ILV+VDRL+KYAHFL
Sbjct: 1229 RGLLQPLPIPSLVWEDISMDFIEGLPVSKGVDTILVIVDRLSKYAHFL 1276


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  159 bits (403), Expect = 2e-37
 Identities = 70/105 (66%), Positives = 86/105 (81%)
 Frame = +3

Query: 12   KLLHEYHDAAIGGHSGEVKTYQRLAEEWFWVGMKRSVTNYVRDCQVCQQQKTASTHPAGL 191
            +L+HEYH   +GGHSG  KTYQRLA EWFW GMK+ V  ++++C VCQQ KT+S  PAGL
Sbjct: 941  RLIHEYHATPMGGHSGIFKTYQRLATEWFWKGMKQDVITFIQECAVCQQNKTSSLAPAGL 1000

Query: 192  LQPLPIPTQVWSEITMDFVEGLPRSHGVDSILVVVDRLTKYAHFL 326
            LQPLPIPT +W +++MDFVEGLP+S G DSILVVVDRL+KY HF+
Sbjct: 1001 LQPLPIPTLIWEDVSMDFVEGLPKSGGWDSILVVVDRLSKYGHFI 1045


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  157 bits (397), Expect = 9e-37
 Identities = 70/108 (64%), Positives = 88/108 (81%)
 Frame = +3

Query: 3    LIPKLLHEYHDAAIGGHSGEVKTYQRLAEEWFWVGMKRSVTNYVRDCQVCQQQKTASTHP 182
            L   LL EYH + +GGHSG  KTY+RLA EW+W GMK+ VT +V++CQ+CQQ KT++  P
Sbjct: 1102 LTTTLLEEYHSSPMGGHSGIFKTYKRLAGEWYWKGMKKDVTTFVQNCQICQQFKTSTLSP 1161

Query: 183  AGLLQPLPIPTQVWSEITMDFVEGLPRSHGVDSILVVVDRLTKYAHFL 326
            AGLLQPLPIP  +W +I+MDFVEGLP+S G D+ILVVVDRL+KYAHF+
Sbjct: 1162 AGLLQPLPIPLAIWEDISMDFVEGLPKSQGWDTILVVVDRLSKYAHFI 1209


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score =  151 bits (382), Expect = 5e-35
 Identities = 64/108 (59%), Positives = 86/108 (79%)
 Frame = +3

Query: 3    LIPKLLHEYHDAAIGGHSGEVKTYQRLAEEWFWVGMKRSVTNYVRDCQVCQQQKTASTHP 182
            L+P +LH +HD  +GGHSG+++TY+R+A E +W GMK  +  YV  C VCQQ KT +  P
Sbjct: 862  LLPTILHTFHDLVVGGHSGQLRTYKRIAAELYWEGMKNDIKIYVDQCPVCQQNKTQALSP 921

Query: 183  AGLLQPLPIPTQVWSEITMDFVEGLPRSHGVDSILVVVDRLTKYAHFL 326
            AGLLQPLPIP+++W +I+MDF+EGLPRS   DS+LVVVD+L+KYAHF+
Sbjct: 922  AGLLQPLPIPSRIWEDISMDFIEGLPRSRTFDSVLVVVDQLSKYAHFV 969


>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
           gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
           Japonica Group]
          Length = 866

 Score =  142 bits (358), Expect = 3e-32
 Identities = 64/105 (60%), Positives = 80/105 (76%)
 Frame = +3

Query: 12  KLLHEYHDAAIGGHSGEVKTYQRLAEEWFWVGMKRSVTNYVRDCQVCQQQKTASTHPAGL 191
           +LL  +HD+A+GGHSGE  TYQR+ + ++W GMK +VT +V+ C VCQ+ KT    PAGL
Sbjct: 448 QLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNMPAGL 507

Query: 192 LQPLPIPTQVWSEITMDFVEGLPRSHGVDSILVVVDRLTKYAHFL 326
           LQPLP+P   WS ITMDFVEGLP+S G D I V+VDR TKYAHF+
Sbjct: 508 LQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIVDRFTKYAHFI 552


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