BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00055020
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX99546.1| RNA polymerase alpha subunit (chloroplast) [Chrys...   138   5e-31
ref|YP_007474761.1| RNA polymerase alpha subunit (chloroplast) [...   138   5e-31
ref|YP_007353798.1| RNA polymerase alpha subunit (chloroplast) [...   138   5e-31
ref|YP_398360.1| RNA polymerase alpha subunit [Lactuca sativa] g...   138   5e-31
ref|YP_004564404.1| RNA polymerase alpha subunit (chloroplast) [...   138   5e-31

>gb|AEX99546.1| RNA polymerase alpha subunit (chloroplast) [Chrysanthemum indicum]
          Length = 336

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/72 (94%), Positives = 70/72 (97%)
 Frame = +3

Query: 3   RTLQWQCVESAADSKRLFYGRFILAPLRKGQADTIGIAMRRALLGEIEGTCITRAKSEKI 182
           RTLQW+CVESAADSKRLFYGRFIL+PL KGQADTIGIAMRRALLGEIEGTCITRAK EKI
Sbjct: 12  RTLQWKCVESAADSKRLFYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKFEKI 71

Query: 183 SHEYSTIMGIQE 218
           SHEYSTIMGIQE
Sbjct: 72  SHEYSTIMGIQE 83


>ref|YP_007474761.1| RNA polymerase alpha subunit (chloroplast) [Chrysanthemum indicum]
           gi|372863238|gb|AEX99310.1| RNA polymerase alpha subunit
           (chloroplast) [Chrysanthemum indicum]
          Length = 335

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/72 (94%), Positives = 70/72 (97%)
 Frame = +3

Query: 3   RTLQWQCVESAADSKRLFYGRFILAPLRKGQADTIGIAMRRALLGEIEGTCITRAKSEKI 182
           RTLQW+CVESAADSKRLFYGRFIL+PL KGQADTIGIAMRRALLGEIEGTCITRAK EKI
Sbjct: 11  RTLQWKCVESAADSKRLFYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKFEKI 70

Query: 183 SHEYSTIMGIQE 218
           SHEYSTIMGIQE
Sbjct: 71  SHEYSTIMGIQE 82


>ref|YP_007353798.1| RNA polymerase alpha subunit (chloroplast) [Chrysanthemum x
           morifolium] gi|375298868|gb|AFA45307.1| RNA polymerase
           alpha subunit (chloroplast) [Chrysanthemum x morifolium]
          Length = 336

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/72 (94%), Positives = 70/72 (97%)
 Frame = +3

Query: 3   RTLQWQCVESAADSKRLFYGRFILAPLRKGQADTIGIAMRRALLGEIEGTCITRAKSEKI 182
           RTLQW+CVESAADSKRLFYGRFIL+PL KGQADTIGIAMRRALLGEIEGTCITRAK EKI
Sbjct: 12  RTLQWKCVESAADSKRLFYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKFEKI 71

Query: 183 SHEYSTIMGIQE 218
           SHEYSTIMGIQE
Sbjct: 72  SHEYSTIMGIQE 83


>ref|YP_398360.1| RNA polymerase alpha subunit [Lactuca sativa]
           gi|90110846|sp|Q332U5.1|RPOA_LACSA RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|78675201|dbj|BAE47627.1| RNA polymerase alpha chain
           [Lactuca sativa]
          Length = 335

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/72 (94%), Positives = 70/72 (97%)
 Frame = +3

Query: 3   RTLQWQCVESAADSKRLFYGRFILAPLRKGQADTIGIAMRRALLGEIEGTCITRAKSEKI 182
           RTLQW+CVESAADSKRL YGRFIL+PL KGQADTIGIAMRRALLGEIEGTCITRAKSEKI
Sbjct: 11  RTLQWKCVESAADSKRLLYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKI 70

Query: 183 SHEYSTIMGIQE 218
           SHEYSTIMGIQE
Sbjct: 71  SHEYSTIMGIQE 82


>ref|YP_004564404.1| RNA polymerase alpha subunit (chloroplast) [Ageratina adenophora]
           gi|334089705|gb|AEG64588.1| RNA polymerase alpha subunit
           (chloroplast) [Ageratina adenophora]
          Length = 335

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/72 (94%), Positives = 70/72 (97%)
 Frame = +3

Query: 3   RTLQWQCVESAADSKRLFYGRFILAPLRKGQADTIGIAMRRALLGEIEGTCITRAKSEKI 182
           RTLQW+CVESAADSKRL YGRFIL+PL KGQADTIGIAMRRALLGEIEGTCITRAKSEKI
Sbjct: 11  RTLQWKCVESAADSKRLLYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKI 70

Query: 183 SHEYSTIMGIQE 218
           SHEYSTIMGIQE
Sbjct: 71  SHEYSTIMGIQE 82