BLASTX nr result

ID: Atractylodes22_contig00054992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054992
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595998.1| Kinesin-4 [Medicago truncatula] gi|355485046...    90   3e-26
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...    80   4e-23
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...    80   4e-23
gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]        80   4e-23
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]               80   3e-22

>ref|XP_003595998.1| Kinesin-4 [Medicago truncatula] gi|355485046|gb|AES66249.1| Kinesin-4
            [Medicago truncatula]
          Length = 962

 Score = 90.1 bits (222), Expect(2) = 3e-26
 Identities = 40/71 (56%), Positives = 53/71 (74%)
 Frame = +3

Query: 96   KQWDLVLPQAEFAYNRSTNRTTGKTPFEIVYGHNPNTPLDLAPIPVSVQLSVEGEQRSIQ 275
            +QWDL+L   EFAYN STN+ TGK PFE+VYG  P +PLDL P P + Q   + E+++ +
Sbjct: 854  RQWDLILAHIEFAYNNSTNQATGKCPFEVVYGMRPLSPLDLTPSPSTQQYIADAEKKANE 913

Query: 276  IKELHEQVRKR 308
            IK+LHEQVR+R
Sbjct: 914  IKKLHEQVRER 924



 Score = 53.1 bits (126), Expect(2) = 3e-26
 Identities = 23/36 (63%), Positives = 28/36 (77%)
 Frame = +2

Query: 2   SDRDVKFVSHFWRTLWNRMGSKLQFSSSHHLQAMGP 109
           SDRDVKF SHF R LW +MG+KLQF+++ H Q  GP
Sbjct: 798 SDRDVKFTSHFSRILWKKMGTKLQFNNASHPQTDGP 833


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 80.5 bits (197), Expect(2) = 4e-23
 Identities = 35/70 (50%), Positives = 52/70 (74%)
 Frame = +3

Query: 102  WDLVLPQAEFAYNRSTNRTTGKTPFEIVYGHNPNTPLDLAPIPVSVQLSVEGEQRSIQIK 281
            W+  LP  EFAYNR+ + +TGKTPFE+VYG NP TPLDL P+P +   +++G++++  +K
Sbjct: 1341 WEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANLDGKKKADMMK 1400

Query: 282  ELHEQVRKRI 311
            ++HEQ R  I
Sbjct: 1401 KIHEQTRLAI 1410



 Score = 52.4 bits (124), Expect(2) = 4e-23
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = +2

Query: 2    SDRDVKFVSHFWRTLWNRMGSKLQFSSSHHLQAMG 106
            SDRD KF+SHFWR LW ++G+KL FS+S H Q  G
Sbjct: 1283 SDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDG 1317


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 80.5 bits (197), Expect(2) = 4e-23
 Identities = 35/70 (50%), Positives = 52/70 (74%)
 Frame = +3

Query: 102  WDLVLPQAEFAYNRSTNRTTGKTPFEIVYGHNPNTPLDLAPIPVSVQLSVEGEQRSIQIK 281
            W+  LP  EFAYNR+ + +TGKTPFE+VYG NP TPLDL P+P +   +++G++++  +K
Sbjct: 1341 WEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANLDGKKKADMMK 1400

Query: 282  ELHEQVRKRI 311
            ++HEQ R  I
Sbjct: 1401 KIHEQTRLAI 1410



 Score = 52.4 bits (124), Expect(2) = 4e-23
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = +2

Query: 2    SDRDVKFVSHFWRTLWNRMGSKLQFSSSHHLQAMG 106
            SDRD KF+SHFWR LW ++G+KL FS+S H Q  G
Sbjct: 1283 SDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDG 1317


>gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]
          Length = 1096

 Score = 80.5 bits (197), Expect(2) = 4e-23
 Identities = 35/70 (50%), Positives = 52/70 (74%)
 Frame = +3

Query: 102  WDLVLPQAEFAYNRSTNRTTGKTPFEIVYGHNPNTPLDLAPIPVSVQLSVEGEQRSIQIK 281
            W+  LP  EFAYNR+ + +TGKTPFE+VYG NP TPLDL P+P +   +++G++++  +K
Sbjct: 849  WEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANLDGKKKADMMK 908

Query: 282  ELHEQVRKRI 311
            ++HEQ R  I
Sbjct: 909  KIHEQTRLAI 918



 Score = 52.4 bits (124), Expect(2) = 4e-23
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = +2

Query: 2   SDRDVKFVSHFWRTLWNRMGSKLQFSSSHHLQAMG 106
           SDRD KF+SHFWR LW ++G+KL FS+S H Q  G
Sbjct: 791 SDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDG 825


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score = 79.7 bits (195), Expect(2) = 3e-22
 Identities = 33/72 (45%), Positives = 53/72 (73%)
 Frame = +3

Query: 96   KQWDLVLPQAEFAYNRSTNRTTGKTPFEIVYGHNPNTPLDLAPIPVSVQLSVEGEQRSIQ 275
            K W+  LP  EFAYN S +  +  +PF+IVYG NP TPLDL P+P+S ++S++G++++  
Sbjct: 1577 KTWEDCLPHVEFAYNHSMHSASKFSPFQIVYGFNPTTPLDLMPLPLSERVSLDGKKKAEL 1636

Query: 276  IKELHEQVRKRI 311
            ++++HEQ +K I
Sbjct: 1637 VQQIHEQAKKNI 1648



 Score = 50.4 bits (119), Expect(2) = 3e-22
 Identities = 20/35 (57%), Positives = 29/35 (82%)
 Frame = +2

Query: 2    SDRDVKFVSHFWRTLWNRMGSKLQFSSSHHLQAMG 106
            SDRD KF+S+FW+TLW+++G+KL FS++ H Q  G
Sbjct: 1521 SDRDTKFLSYFWKTLWSKLGTKLLFSTTCHPQTDG 1555


Top