BLASTX nr result

ID: Atractylodes22_contig00054961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054961
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]   100   2e-19
ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...    66   3e-09
ref|XP_002530827.1| NADH-ubiquinone oxidoreductase chain, putati...    64   1e-08
ref|XP_002455684.1| hypothetical protein SORBIDRAFT_03g020225 [S...    62   4e-08
dbj|BAF01911.1| NADH dehydrogenase subunit 4 [Arabidopsis thaliana]    60   2e-07

>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
          Length = 280

 Score =  100 bits (248), Expect = 2e-19
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = -3

Query: 243 CVCQVRFFLVGLGGFDQKCYAYTQDYPSSRKLRGDYFTTTDDRP 112
           CVCQVRFFLVGLGGFDQKCYAYTQDYPSSRKLRGDYFTTTDDRP
Sbjct: 237 CVCQVRFFLVGLGGFDQKCYAYTQDYPSSRKLRGDYFTTTDDRP 280


>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477316|gb|AES58519.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 556

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = +2

Query: 2   YVLPESVLIPMLCGAEHLIFAGIKLFLCRGL 94
           YVLPESVLIPMLCGAEHL+FAGIKLFLCRGL
Sbjct: 143 YVLPESVLIPMLCGAEHLLFAGIKLFLCRGL 173


>ref|XP_002530827.1| NADH-ubiquinone oxidoreductase chain, putative [Ricinus communis]
           gi|223529591|gb|EEF31540.1| NADH-ubiquinone
           oxidoreductase chain, putative [Ricinus communis]
          Length = 64

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/33 (90%), Positives = 30/33 (90%)
 Frame = +2

Query: 2   YVLPESVLIPMLCGAEHLIFAGIKLFLCRGLAQ 100
           YVLPESVLIPMLCGAEHLIF G KLFLCRGL Q
Sbjct: 32  YVLPESVLIPMLCGAEHLIFPGKKLFLCRGLVQ 64


>ref|XP_002455684.1| hypothetical protein SORBIDRAFT_03g020225 [Sorghum bicolor]
           gi|241927659|gb|EES00804.1| hypothetical protein
           SORBIDRAFT_03g020225 [Sorghum bicolor]
          Length = 152

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = +2

Query: 2   YVLPESVLIPMLCGAEHLIFAGIKLFLCRGLAQ 100
           YVL ESV IPMLCGAEHL+FAGIKLFLCRGL Q
Sbjct: 120 YVLSESVPIPMLCGAEHLLFAGIKLFLCRGLVQ 152


>dbj|BAF01911.1| NADH dehydrogenase subunit 4 [Arabidopsis thaliana]
          Length = 175

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/33 (84%), Positives = 29/33 (87%)
 Frame = +2

Query: 2   YVLPESVLIPMLCGAEHLIFAGIKLFLCRGLAQ 100
           YV PESV IPMLCGAE+LIFAG KLFLCRGL Q
Sbjct: 143 YVFPESVPIPMLCGAEYLIFAGRKLFLCRGLVQ 175


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