BLASTX nr result

ID: Atractylodes22_contig00054894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054894
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514699.1| ATP binding protein, putative [Ricinus commu...    65   4e-09
ref|XP_002318592.1| chromatin remodeling complex subunit [Populu...    64   1e-08
ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-co...    64   1e-08
tpg|DAA63466.1| TPA: hypothetical protein ZEAMMB73_458112 [Zea m...    59   5e-07
ref|XP_002460966.1| hypothetical protein SORBIDRAFT_02g038340 [S...    59   5e-07

>ref|XP_002514699.1| ATP binding protein, putative [Ricinus communis]
            gi|223546303|gb|EEF47805.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1229

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/78 (46%), Positives = 45/78 (57%)
 Frame = +1

Query: 73   HESRRENRVLPHNSLEADKSNMMEIPSDGEPIDQIEADTDCIPAHSLRFEVSKYTGRIHL 252
            HE  +E      N L   K     +P+ G   D+  ++      +SLRFEVSKYTGRIHL
Sbjct: 811  HEIEKEQ-----NPLSQTKETYNHVPALGNEADETFSNQ----VYSLRFEVSKYTGRIHL 861

Query: 253  YSCILGVEERPTPLCKNF 306
            YSCILG + RP PL +NF
Sbjct: 862  YSCILGTDPRPQPLFENF 879


>ref|XP_002318592.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222859265|gb|EEE96812.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 726

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 13/112 (11%)
 Frame = +1

Query: 10  IVPDINNVELMASKGTVEEYTHESRRENRVLPHNSLE-------ADKSNMMEIPS----D 156
           ++ ++ + + +A+K        E R  +RV    S E       ++K N + + +    D
Sbjct: 268 VLDNVTDKDSVANKNLEGISEIEIRSSSRVSSSESSEGHEGNDQSEKENKLCVQTTETND 327

Query: 157 GEPIDQIEADTDCIP--AHSLRFEVSKYTGRIHLYSCILGVEERPTPLCKNF 306
            E   Q EAD +C     +SLRFEVSKYTGRIHLYSCILG + RP PL +NF
Sbjct: 328 SELAQQNEAD-ECWSNEVYSLRFEVSKYTGRIHLYSCILGKDSRPQPLYENF 378


>ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
            [Vitis vinifera]
          Length = 1280

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 13/111 (11%)
 Frame = +1

Query: 13   VPDINNVELMASKGTVE------------EYTHESRRENRVLPHNSLEADKSNMMEIPSD 156
            VPDI   E+  S G +E            + + +S  E+++   +++  + S    +  D
Sbjct: 807  VPDIEMQEVSVSSGELEGNAVTLGRVSFCKLSRQSEDEDKMHKADNIFPETS----LVDD 862

Query: 157  GEPIDQIE-ADTDCIPAHSLRFEVSKYTGRIHLYSCILGVEERPTPLCKNF 306
            GEP+ +I+  ++       LRF+VS+YTGRIHLYSCI G++ RP PL +NF
Sbjct: 863  GEPVQKIDMGESYPNQVDFLRFQVSQYTGRIHLYSCIPGIDSRPRPLFENF 913


>tpg|DAA63466.1| TPA: hypothetical protein ZEAMMB73_458112 [Zea mays]
          Length = 766

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = +1

Query: 196 IPAHSLRFEVSKYTGRIHLYSCILGVEERPTPLCKNF 306
           I   SLRFEVS++TGRIHLYSC+ G + RP PLC+NF
Sbjct: 399 IQVESLRFEVSRHTGRIHLYSCVPGHDSRPKPLCENF 435


>ref|XP_002460966.1| hypothetical protein SORBIDRAFT_02g038340 [Sorghum bicolor]
           gi|241924343|gb|EER97487.1| hypothetical protein
           SORBIDRAFT_02g038340 [Sorghum bicolor]
          Length = 1150

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = +1

Query: 196 IPAHSLRFEVSKYTGRIHLYSCILGVEERPTPLCKNF 306
           I   SLRFEVS++TGRIHLYSC+ G + RP PLC+NF
Sbjct: 783 IQVESLRFEVSRHTGRIHLYSCVPGHDSRPKPLCENF 819


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