BLASTX nr result

ID: Atractylodes22_contig00054892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054892
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   101   6e-20
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   100   1e-19
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   100   2e-19
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    81   1e-13
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    79   3e-13

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  101 bits (252), Expect = 6e-20
 Identities = 53/106 (50%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
 Frame = +2

Query: 2   EKGLCFRCDDKWSAGHRCRRR*LSVLLA------QXXXXXXXXXXXXXXXXXXXXLSSEI 163
           E GLCFRCD+KW+ GHRC+++ LS+LL       +                     S EI
Sbjct: 347 EHGLCFRCDEKWAIGHRCKKKELSILLGHEEEEEEYGSLMENIQPAHPDDSQLEIHSPEI 406

Query: 164 SLNSVIGLTNPKTTKM*GKIQGEEVIVMVDPGATHNFISQEAVNRL 301
           SLNSV+G+++PKT KM G I G++VIVMVDPGATHNFIS + V RL
Sbjct: 407 SLNSVMGISSPKTLKMEGTIYGQKVIVMVDPGATHNFISLDTVRRL 452


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/102 (48%), Positives = 65/102 (63%), Gaps = 3/102 (2%)
 Frame = +2

Query: 5   KGLCFRCDDKWSAGHRCRRR*LSVLLAQXXXXXXXXXXXXXXXXXXXX---LSSEISLNS 175
           KGLCF+CD+KW  GH+CRR+ LSVL  +                       +  E+SLNS
Sbjct: 414 KGLCFKCDEKWGVGHQCRRKELSVLFMEDNEEDELEGALSGSEAPPSPTEEIPPEVSLNS 473

Query: 176 VIGLTNPKTTKM*GKIQGEEVIVMVDPGATHNFISQEAVNRL 301
           VIGL+NPKT K+ G I   EV+VM+DPGATHNF+S +A+++L
Sbjct: 474 VIGLSNPKTMKLSGLIDNHEVVVMIDPGATHNFLSLKAIDKL 515


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 54/108 (50%), Positives = 65/108 (60%), Gaps = 8/108 (7%)
 Frame = +2

Query: 2   EKGLCFRCDDKWSAGHRCRRR*LSVLLA--------QXXXXXXXXXXXXXXXXXXXXLSS 157
           E+GLCFRCDDKWS GHRC++  LSVLL+                             ++ 
Sbjct: 304 ERGLCFRCDDKWSVGHRCKKE-LSVLLSCKEDEEIEYGELENAPQPEIPNTHIAETFVNP 362

Query: 158 EISLNSVIGLTNPKTTKM*GKIQGEEVIVMVDPGATHNFISQEAVNRL 301
           EISLNSV+G +NPKT K+ G I GE VIVM+DPGATHNF+S   V RL
Sbjct: 363 EISLNSVMGFSNPKTLKLRGTIYGEAVIVMIDPGATHNFVSIHTVERL 410


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   EKGLCFRCDDKWSAGHRCRRR*LSV-LLAQXXXXXXXXXXXXXXXXXXXXLSSEISLNSV 178
           EKGLC+RCD  +S GHRC+ R L + ++A                        E+SL+SV
Sbjct: 302 EKGLCYRCDKPFSKGHRCKNRELKLCVVADDLIDTEMSEEDNDGGMVEIGPIVELSLSSV 361

Query: 179 IGLTNPKTTKM*GKIQGEEVIVMVDPGATHNFISQEAVNRL 301
           +GLT P T+K+ GK++  EV+VM+D GATHNFIS   V  +
Sbjct: 362 VGLTAPGTSKIKGKVEDREVVVMIDCGATHNFISLRLVEEM 402


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 45/104 (43%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
 Frame = +2

Query: 2    EKGLCFRCDDKWSAGHRCRRR*LSVLLAQXXXXXXXXXXXXXXXXXXXXL----SSEISL 169
            EKGL F+C++K+S GHRC++  L VLL                      +    + E+SL
Sbjct: 989  EKGLWFKCEEKFSPGHRCKKE-LRVLLVHEDEEEDDNQFDDRATEEPALIELKDAVELSL 1047

Query: 170  NSVIGLTNPKTTKM*GKIQGEEVIVMVDPGATHNFISQEAVNRL 301
            NSV+GLT P T K+ G I  +EVI++VD GATHNF+S E V +L
Sbjct: 1048 NSVVGLTTPGTMKIKGTIGSKEVIILVDSGATHNFLSLELVQQL 1091


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