BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054829
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...   119   2e-25
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]     119   2e-25
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     119   3e-25
emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group] gi...   117   7e-25
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...   116   2e-24

>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1073

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/87 (65%), Positives = 68/87 (78%), Gaps = 3/87 (3%)
 Frame = -2

Query: 483  VDAPTNCRVVGCKWVFKKKTDMDGNV---KARLVAKCFTQTQGVDYEETFSPVAMIKSIR 313
            VD P   + + CKWVFKKKTD+DGNV   KARLVAK F Q QGVDY+ETFSPVAM+KSIR
Sbjct: 760  VDPPDGVKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVAMLKSIR 819

Query: 312  ILIVVVAYYDYEIWQKDVKTVFRSCYH 232
            I++ + AY+DYEIWQ +VKT F +  H
Sbjct: 820  IVLAIAAYFDYEIWQMEVKTAFLNGNH 846


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/87 (65%), Positives = 68/87 (78%), Gaps = 3/87 (3%)
 Frame = -2

Query: 483  VDAPTNCRVVGCKWVFKKKTDMDGNV---KARLVAKCFTQTQGVDYEETFSPVAMIKSIR 313
            VD P   + + CKWVFKKKTD+DGNV   KARLVAK F Q QGVDY+ETFSPVAM+KSIR
Sbjct: 750  VDPPDGVKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVAMLKSIR 809

Query: 312  ILIVVVAYYDYEIWQKDVKTVFRSCYH 232
            I++ + AY+DYEIWQ +VKT F +  H
Sbjct: 810  IVLAIAAYFDYEIWQMEVKTAFLNGNH 836


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/82 (68%), Positives = 65/82 (79%), Gaps = 3/82 (3%)
 Frame = -2

Query: 483  VDAPTNCRVVGCKWVFKKKTDMDGNV---KARLVAKCFTQTQGVDYEETFSPVAMIKSIR 313
            VD P   + + CKW+FKKK DMDGNV   KARLVAK F Q QGVDY+ETFSPVAM+KSIR
Sbjct: 830  VDPPDGVKTIECKWLFKKKADMDGNVHIYKARLVAKGFKQIQGVDYDETFSPVAMLKSIR 889

Query: 312  ILIVVVAYYDYEIWQKDVKTVF 247
            I++ + AY+DYEIWQ DVKT F
Sbjct: 890  IILAIAAYFDYEIWQMDVKTAF 911


>emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group]
           gi|38347202|emb|CAD40526.2| OSJNBa0023J03.14 [Oryza
           sativa Japonica Group] gi|116308930|emb|CAH66059.1|
           OSIGBa0125J07.8 [Oryza sativa Indica Group]
           gi|116309043|emb|CAH66155.1| OSIGBa0113B06.1 [Oryza
           sativa Indica Group]
          Length = 704

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/82 (67%), Positives = 67/82 (81%), Gaps = 3/82 (3%)
 Frame = -2

Query: 483 VDAPTNCRVVGCKWVFKKKTDMDGNV---KARLVAKCFTQTQGVDYEETFSPVAMIKSIR 313
           VD+P + + + CKWVFKKK D+DGNV   KARLVAK F Q QGVDY+ETFSPVA++KSIR
Sbjct: 336 VDSPDDVKAIECKWVFKKKIDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVAILKSIR 395

Query: 312 ILIVVVAYYDYEIWQKDVKTVF 247
           I++ + AY+DYEIWQ DVKT F
Sbjct: 396 IVLAIAAYFDYEIWQMDVKTAF 417


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/82 (67%), Positives = 65/82 (79%), Gaps = 3/82 (3%)
 Frame = -2

Query: 483 VDAPTNCRVVGCKWVFKKKTDMDGNV---KARLVAKCFTQTQGVDYEETFSPVAMIKSIR 313
           VD P   + + CKWVFKKKTD+DGNV   KARLVAK F Q QGVDY+ETFSP AM+KSIR
Sbjct: 615 VDPPDGVKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPFAMLKSIR 674

Query: 312 ILIVVVAYYDYEIWQKDVKTVF 247
           I++ + AY++YEIWQ DVKT F
Sbjct: 675 IVLAIAAYFNYEIWQMDVKTTF 696