BLASTX nr result
ID: Atractylodes22_contig00054815
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00054815
(350 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi... 181 6e-44
ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containi... 175 3e-42
ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|2... 171 4e-41
ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containi... 170 1e-40
ref|XP_003629790.1| Pentatricopeptide repeat-containing protein ... 167 6e-40
>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 181 bits (459), Expect = 6e-44
Identities = 89/113 (78%), Positives = 100/113 (88%), Gaps = 1/113 (0%)
Frame = -2
Query: 340 LEKGKEVHNYIRENKMQS-LPVSNALMDMYAKCGSMDDSYSVFSETTSKDIVSWNTMIGG 164
LE GK+VHNYI+ENKMQS L VSNALMDMYAKCGSM D++SVFSE KDIVSWNTMIGG
Sbjct: 368 LENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGG 427
Query: 163 YSKNCLPNEALDLFIEMQREIKPDNVTMTCILPACASLAALNKGREIHGHILR 5
YSKN LPNEAL+LF+EMQ KP+++TM CILPACASLAAL +G+EIHGHILR
Sbjct: 428 YSKNSLPNEALNLFVEMQYNSKPNSITMACILPACASLAALERGQEIHGHILR 480
Score = 83.6 bits (205), Expect = 2e-14
Identities = 41/109 (37%), Positives = 69/109 (63%), Gaps = 2/109 (1%)
Frame = -2
Query: 331 GKEVHNY-IRENKMQSLPVSNALMDMYAKCGSMDDSYSVFSETTSKDIVSWNTMIGGYSK 155
G+ +H Y I+ + + L ++N L+DMY+K G+++ + VF + +VSW +MI GY++
Sbjct: 270 GRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAR 329
Query: 154 NCLPNEALDLFIEMQRE-IKPDNVTMTCILPACASLAALNKGREIHGHI 11
L + ++ LF EM++E I PD T+T IL ACA L G+++H +I
Sbjct: 330 EGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYI 378
Score = 77.4 bits (189), Expect = 1e-12
Identities = 42/106 (39%), Positives = 63/106 (59%), Gaps = 2/106 (1%)
Frame = -2
Query: 343 SLEKGKEVHNYIRENKMQ-SLPVSNALMDMYAKCGSMDDSYSVFSETTSKDIVSWNTMIG 167
+LE+G+E+H +I N V+NAL+DMY KCG++ + +F KD+VSW MI
Sbjct: 467 ALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIA 526
Query: 166 GYSKNCLPNEALDLFIEMQRE-IKPDNVTMTCILPACASLAALNKG 32
GY + +EA+ F EM+ I+PD V+ IL AC+ L++G
Sbjct: 527 GYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG 572
Score = 62.4 bits (150), Expect = 4e-08
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 19/131 (14%)
Frame = -2
Query: 340 LEKGKEVHNYIRENKMQSLPVSNALMDMYAKCGSMDDSYSVFS----------------- 212
L +G+ + + + K+ + N LM+ YAK G+ +S S+F
Sbjct: 152 LREGRRIFDKVANEKVF---LWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLF 208
Query: 211 -ETTSKDIVSWNTMIGGYSKNCLPNEALDLFIEM-QREIKPDNVTMTCILPACASLAALN 38
E +D++SWN+MI GY N L + LDLF +M I D TM ++ C++ L
Sbjct: 209 DELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLL 268
Query: 37 KGREIHGHILR 5
GR +HG+ ++
Sbjct: 269 LGRALHGYAIK 279
>ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 175 bits (444), Expect = 3e-42
Identities = 82/115 (71%), Positives = 102/115 (88%), Gaps = 1/115 (0%)
Frame = -2
Query: 343 SLEKGKEVHNYIRENKMQS-LPVSNALMDMYAKCGSMDDSYSVFSETTSKDIVSWNTMIG 167
SL+KG+EVHN+I++N M S LPVSNALM+MYAKCGSM+++ +FS+ K+IVSWNTMIG
Sbjct: 375 SLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIG 434
Query: 166 GYSKNCLPNEALDLFIEMQREIKPDNVTMTCILPACASLAALNKGREIHGHILRK 2
GYS+N LPNEAL LF++MQ+++KPD+VTM C+LPACA LAAL KGREIHGHILRK
Sbjct: 435 GYSQNSLPNEALQLFLDMQKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRK 489
Score = 79.7 bits (195), Expect = 2e-13
Identities = 41/113 (36%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Frame = -2
Query: 343 SLEKGKEVHNY-IRENKMQSLPVSNALMDMYAKCGSMDDSYSVFSETTSKDIVSWNTMIG 167
+L G+ +H Y ++ + +N L+DMY+KCG+++ + VF + IVSW ++I
Sbjct: 274 NLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIA 333
Query: 166 GYSKNCLPNEALDLFIEMQ-REIKPDNVTMTCILPACASLAALNKGREIHGHI 11
+ + L EA+ LF EMQ + ++PD +T ++ ACA +L+KGRE+H HI
Sbjct: 334 AHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHI 386
Score = 71.2 bits (173), Expect = 8e-11
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Frame = -2
Query: 328 KEVHNYIRENKMQSL-PVSNALMDMYAKCGSMDDSYSVFSETTSKDIVSWNTMIGGYSKN 152
K VH Y+ + S V N+L+ Y KCG ++ + +F E + +D+VSWN+MI G + N
Sbjct: 178 KRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMN 237
Query: 151 CLPNEALDLFIEM-QREIKPDNVTMTCILPACASLAALNKGREIHGH 14
L+ FI+M + D+ T+ +L ACA++ L GR +H +
Sbjct: 238 GFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAY 284
Score = 70.9 bits (172), Expect = 1e-10
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Frame = -2
Query: 343 SLEKGKEVHNYI-RENKMQSLPVSNALMDMYAKCGSMDDSYSVFSETTSKDIVSWNTMIG 167
+LEKG+E+H +I R+ L V+ AL+DMY KCG + + +F KD++ W MI
Sbjct: 475 ALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIA 534
Query: 166 GYSKNCLPNEALDLFIEMQ-REIKPDNVTMTCILPACASLAALNKG 32
GY + EA+ F +M+ I+P+ + T IL AC L +G
Sbjct: 535 GYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEG 580
Score = 65.5 bits (158), Expect = 4e-09
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Frame = -2
Query: 343 SLEKGKEVHNYIRENKMQSLPVSNA-LMDMYAKCGSMDDSYSVFSETTSKDIVSWNTMIG 167
SLE GK VH+ I N M V A L+ MY CG + +F + I WN ++
Sbjct: 72 SLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMS 131
Query: 166 GYSKNCLPNEALDLFIEMQR-EIKPDNVTMTCILPACASLAALNKGREIHGHILR 5
Y+K E++ LF +MQ I+ D+ T TC+L A+ A + + + +HG++L+
Sbjct: 132 EYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLK 186
>ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|222848697|gb|EEE86244.1|
predicted protein [Populus trichocarpa]
Length = 571
Score = 171 bits (434), Expect = 4e-41
Identities = 84/116 (72%), Positives = 97/116 (83%), Gaps = 1/116 (0%)
Frame = -2
Query: 349 NCSLEKGKEVHNYIRENKMQS-LPVSNALMDMYAKCGSMDDSYSVFSETTSKDIVSWNTM 173
N SLE GK+VHNYIREN MQS + V NALMDMYAKCGSM+D+ SVF E KDI+SWNTM
Sbjct: 112 NGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTM 171
Query: 172 IGGYSKNCLPNEALDLFIEMQREIKPDNVTMTCILPACASLAALNKGREIHGHILR 5
IGGYSKN LPNEAL LF +M E+KPD T+ CILPACASLA+L++G+E+HGHILR
Sbjct: 172 IGGYSKNSLPNEALSLFGDMVLEMKPDGTTLACILPACASLASLDRGKEVHGHILR 227
Score = 80.1 bits (196), Expect = 2e-13
Identities = 37/89 (41%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Frame = -2
Query: 274 NALMDMYAKCGSMDDSYSVFSETTSKDIVSWNTMIGGYSKNCLPNEALDLFIEMQRE-IK 98
N L+DMYAKCG +D + VF + + +V+W ++I Y++ L +EA+ LF EM RE +
Sbjct: 37 NTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVS 96
Query: 97 PDNVTMTCILPACASLAALNKGREIHGHI 11
PD T+T +L ACA +L G+++H +I
Sbjct: 97 PDIFTITTVLHACACNGSLENGKDVHNYI 125
Score = 77.0 bits (188), Expect = 1e-12
Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Frame = -2
Query: 343 SLEKGKEVHNYIRENKMQS-LPVSNALMDMYAKCGSMDDSYSVFSETTSKDIVSWNTMIG 167
SL++GKEVH +I N S V+NAL+DMY KCG + +F +KD+++W MI
Sbjct: 214 SLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIA 273
Query: 166 GYSKNCLPNEALDLFIEM-QREIKPDNVTMTCILPACASLAALNKG 32
GY + N A+ F EM Q I+PD V+ IL AC+ L++G
Sbjct: 274 GYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEG 319
>ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 170 bits (430), Expect = 1e-40
Identities = 83/114 (72%), Positives = 95/114 (83%), Gaps = 1/114 (0%)
Frame = -2
Query: 343 SLEKGKEVHNYIRENKMQ-SLPVSNALMDMYAKCGSMDDSYSVFSETTSKDIVSWNTMIG 167
SL+KG++VHNYIR+N M LPVSNALMDMYAKCGSM+++Y VFS+ KDIVSWNTMIG
Sbjct: 770 SLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIG 829
Query: 166 GYSKNCLPNEALDLFIEMQREIKPDNVTMTCILPACASLAALNKGREIHGHILR 5
GYSKN LPNEAL LF EMQ+E +PD +TM C+LPAC SLAAL GR IHG ILR
Sbjct: 830 GYSKNSLPNEALKLFAEMQKESRPDGITMACLLPACGSLAALEIGRGIHGCILR 883
Score = 82.8 bits (203), Expect = 3e-14
Identities = 40/113 (35%), Positives = 71/113 (62%), Gaps = 2/113 (1%)
Frame = -2
Query: 343 SLEKGKEVHNY-IRENKMQSLPVSNALMDMYAKCGSMDDSYSVFSETTSKDIVSWNTMIG 167
SL G+ +H ++ + + +N L+DMY+KCG+++D+ F + K +VSW ++I
Sbjct: 669 SLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIA 728
Query: 166 GYSKNCLPNEALDLFIEMQ-REIKPDNVTMTCILPACASLAALNKGREIHGHI 11
Y + L ++A+ LF EM+ + + PD +MT +L ACA +L+KGR++H +I
Sbjct: 729 AYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYI 781
Score = 80.1 bits (196), Expect = 2e-13
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 2/106 (1%)
Frame = -2
Query: 343 SLEKGKEVHNYIRENKMQS-LPVSNALMDMYAKCGSMDDSYSVFSETTSKDIVSWNTMIG 167
+LE G+ +H I N S L V+NAL+DMY KCGS+ + +F KD+++W MI
Sbjct: 870 ALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMIS 929
Query: 166 GYSKNCLPNEALDLFIEMQ-REIKPDNVTMTCILPACASLAALNKG 32
G + L NEA+ F +M+ IKPD +T T IL AC+ LN+G
Sbjct: 930 GCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEG 975
Score = 65.5 bits (158), Expect = 4e-09
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = -2
Query: 280 VSNALMDMYAKCGSMDDSYSVFSETTSKDIVSWNTMIGGYSKNCLPNEALDLFIEMQ-RE 104
V N+L+ Y K G +D ++ +F E +D+VSWN+MI G N + AL+ F++M
Sbjct: 590 VVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILR 649
Query: 103 IKPDNVTMTCILPACASLAALNKGREIHG 17
+ D T+ + ACA++ +L+ GR +HG
Sbjct: 650 VGVDLATLVNSVAACANVGSLSLGRALHG 678
Score = 55.1 bits (131), Expect = 6e-06
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Frame = -2
Query: 340 LEKGKEVHNYIRENKMQSLPVSNA-LMDMYAKCGSMDDSYSVFSETTSKD-IVSWNTMIG 167
L++GK VH+ I N + V A L+ MY CG++ + +F S + + WN M+
Sbjct: 467 LQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMS 526
Query: 166 GYSKNCLPNEALDLFIEMQR-EIKPDNVTMTCILPACASLAALNKGREIHGHILR 5
Y+K E++ LF +MQ+ I ++ T +CIL A+L + + + IHG + +
Sbjct: 527 EYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYK 581
>ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 908
Score = 167 bits (424), Expect = 6e-40
Identities = 77/115 (66%), Positives = 102/115 (88%), Gaps = 1/115 (0%)
Frame = -2
Query: 343 SLEKGKEVHNYIRENKMQS-LPVSNALMDMYAKCGSMDDSYSVFSETTSKDIVSWNTMIG 167
SL+KG++VH+Y+ +N M S LPV+NAL++MYAKCGS++++ VFS+ KDIVSWNTMIG
Sbjct: 412 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 471
Query: 166 GYSKNCLPNEALDLFIEMQREIKPDNVTMTCILPACASLAALNKGREIHGHILRK 2
GYS+N LPNEAL+LF++MQ++ KPD++TM C+LPACA LAAL+KGREIHGHILR+
Sbjct: 472 GYSQNLLPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHILRR 526
Score = 84.0 bits (206), Expect = 1e-14
Identities = 40/115 (34%), Positives = 75/115 (65%), Gaps = 2/115 (1%)
Frame = -2
Query: 343 SLEKGKEVHNY-IRENKMQSLPVSNALMDMYAKCGSMDDSYSVFSETTSKDIVSWNTMIG 167
+L G+ +H + ++ + + SN L+DMY+KCG+++ + VF + IVSW ++I
Sbjct: 311 NLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIA 370
Query: 166 GYSKNCLPNEALDLFIEMQ-REIKPDNVTMTCILPACASLAALNKGREIHGHILR 5
Y + L ++A+ LF EMQ + ++PD T+T I+ ACA ++L+KGR++H ++++
Sbjct: 371 AYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK 425
Score = 80.1 bits (196), Expect = 2e-13
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 2/106 (1%)
Frame = -2
Query: 343 SLEKGKEVHNYI-RENKMQSLPVSNALMDMYAKCGSMDDSYSVFSETTSKDIVSWNTMIG 167
+L+KG+E+H +I R L V+ AL+DMYAKCG + + +F KD++SW MI
Sbjct: 512 ALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIA 571
Query: 166 GYSKNCLPNEALDLFIEMQ-REIKPDNVTMTCILPACASLAALNKG 32
GY + NEA+ F EM+ I+PD + + IL AC+ LN+G
Sbjct: 572 GYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEG 617
Score = 69.3 bits (168), Expect = 3e-10
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Frame = -2
Query: 328 KEVHNYIRENKMQS-LPVSNALMDMYAKCGSMDDSYSVFSETTSKDIVSWNTMIGGYSKN 152
K VH Y+ + S V N+L+ Y K G ++ ++++F E + D+VSWN+MI G N
Sbjct: 215 KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVN 274
Query: 151 CLPNEALDLFIEMQ-REIKPDNVTMTCILPACASLAALNKGREIHG 17
L++FI+M ++ D T+ +L ACA++ L+ GR +HG
Sbjct: 275 GFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHG 320
Score = 59.7 bits (143), Expect = 2e-07
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Frame = -2
Query: 343 SLEKGKEVHNYIRENKMQSLPVSNA-LMDMYAKCGSMDDSYSVFSETTSKDIVSWNTMIG 167
SLE GK VH+ I N + A L+ MY CG + +F + + + WN ++
Sbjct: 109 SLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMS 168
Query: 166 GYSKNCLPNEALDLFIEMQR-EIKPDNVTMTCILPACASLAALNKGREIHGHILR 5
Y+K E++ LF +MQ+ + + T TC+L A+L + + + +HG++L+
Sbjct: 169 EYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLK 223