BLASTX nr result

ID: Atractylodes22_contig00054739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054739
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus commun...    60   2e-12
ref|XP_002307206.1| predicted protein [Populus trichocarpa] gi|2...    53   2e-10
emb|CBI38416.3| unnamed protein product [Vitis vinifera]               52   9e-10
emb|CAN80033.1| hypothetical protein VITISV_007071 [Vitis vinifera]    51   1e-09
ref|XP_003516528.1| PREDICTED: uncharacterized protein LOC100794...    48   1e-08

>ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus communis]
           gi|223539096|gb|EEF40692.1| poly(A) polymerase, putative
           [Ricinus communis]
          Length = 675

 Score = 60.1 bits (144), Expect(2) = 2e-12
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
 Frame = -2

Query: 429 MAAISVKRNFFLSRFKTLLPLQLQNLYHKFVEVGNKRRSRIDKDSFFEPGE-FNVSKWKK 253
           MA I   ++ F SR + L  LQ  N  H  +E        I  DS  +     ++SKWKK
Sbjct: 1   MAIIFRAKSCFASRLRNLTTLQRFN--HSLIEQTPLYPRMISSDSKDQQSTVIDISKWKK 58

Query: 252 MDSRSLGITRTMVPSSPYTLVKILRTRGFEAY 157
           +++ ++GI R+M+P SP+ ++KIL  +GFEAY
Sbjct: 59  INASAVGIKRSMIPPSPWLVLKILHNKGFEAY 90



 Score = 37.0 bits (84), Expect(2) = 2e-12
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -3

Query: 50  GFEAYLVGGCVRDLLL 3
           GFEAYLVGGCVRDLLL
Sbjct: 86  GFEAYLVGGCVRDLLL 101


>ref|XP_002307206.1| predicted protein [Populus trichocarpa] gi|222856655|gb|EEE94202.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score = 52.8 bits (125), Expect(2) = 2e-10
 Identities = 21/37 (56%), Positives = 32/37 (86%)
 Frame = -2

Query: 267 SKWKKMDSRSLGITRTMVPSSPYTLVKILRTRGFEAY 157
           SKW+K+++R  GITR+M+P +P+T++K+LR  GFEAY
Sbjct: 4   SKWRKVNARYHGITRSMIPDAPWTVLKLLRVGGFEAY 40



 Score = 37.0 bits (84), Expect(2) = 2e-10
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -3

Query: 50 GFEAYLVGGCVRDLLL 3
          GFEAYLVGGCVRDLLL
Sbjct: 36 GFEAYLVGGCVRDLLL 51


>emb|CBI38416.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score = 51.6 bits (122), Expect(2) = 9e-10
 Identities = 21/38 (55%), Positives = 31/38 (81%)
 Frame = -2

Query: 270 VSKWKKMDSRSLGITRTMVPSSPYTLVKILRTRGFEAY 157
           +SKWKK+DSR+ GITR+M+ S  + ++K+L+  GFEAY
Sbjct: 1   MSKWKKLDSRTFGITRSMISSPSWVVLKLLQREGFEAY 38



 Score = 36.2 bits (82), Expect(2) = 9e-10
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = -3

Query: 50 GFEAYLVGGCVRDLLL 3
          GFEAYLVGGCVRDL+L
Sbjct: 34 GFEAYLVGGCVRDLIL 49


>emb|CAN80033.1| hypothetical protein VITISV_007071 [Vitis vinifera]
          Length = 693

 Score = 50.8 bits (120), Expect(2) = 1e-09
 Identities = 21/38 (55%), Positives = 31/38 (81%)
 Frame = -2

Query: 270 VSKWKKMDSRSLGITRTMVPSSPYTLVKILRTRGFEAY 157
           +SKWKK+DSR+ GITR+M+ S  + ++K+L+  GFEAY
Sbjct: 1   MSKWKKLDSRTFGITRSMISSPSWFVLKLLQREGFEAY 38



 Score = 36.2 bits (82), Expect(2) = 1e-09
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = -3

Query: 50 GFEAYLVGGCVRDLLL 3
          GFEAYLVGGCVRDL+L
Sbjct: 34 GFEAYLVGGCVRDLIL 49


>ref|XP_003516528.1| PREDICTED: uncharacterized protein LOC100794882 [Glycine max]
          Length = 714

 Score = 48.1 bits (113), Expect(2) = 1e-08
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = -2

Query: 396 LSRFKTLLPLQLQNLYHKFVEVGNKRRSRIDKDSFFEP--GEFNVSKWKKMDSRSLGITR 223
           L+R KTL+    Q  +    +   +  S  + D  +    G  +VSKWK +D+  LGIT 
Sbjct: 9   LTRLKTLVNSHSQGFHSPAPKRPKQDPSSTENDLDYSVCRGRIDVSKWKTLDAEELGITS 68

Query: 222 TMVPSSPYTLVKILRTRGFEAY 157
           +M+      ++K+LR +GFE+Y
Sbjct: 69  SMISYPSQFVLKLLRRKGFESY 90



 Score = 35.8 bits (81), Expect(2) = 1e-08
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = -3

Query: 50  GFEAYLVGGCVRDLLL 3
           GFE+YLVGGCVRDLLL
Sbjct: 86  GFESYLVGGCVRDLLL 101


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