BLASTX nr result

ID: Atractylodes22_contig00054583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054583
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...   126   2e-27
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   125   4e-27
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]     124   8e-27
dbj|BAG72154.1| hypothetical protein [Lotus japonicus]                123   1e-26
dbj|BAG72152.1| hypothetical protein [Lotus japonicus]                123   1e-26

>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/105 (55%), Positives = 74/105 (70%)
 Frame = -2

Query: 315  RTLEQYLRCMASDRPREWGKWLPWAEYWYNTTYHAGLKCSPFKVLYGRDPPTLLRYKPDS 136
            R LE YLRC A  RP  W +WLPWAEYWYNT+YH+  K +PF+ +YGR+PP LLRY    
Sbjct: 1374 RCLESYLRCFAGRRPTSWFQWLPWAEYWYNTSYHSATKTTPFQAVYGREPPVLLRYGDIP 1433

Query: 135  TGIQAVEQMLQEREEILDEVRMNLLKAQLRMKQQADSSRRDDVFE 1
            T    VE++L++R+ +L E+R NL  AQ +MK+ AD SRRD  FE
Sbjct: 1434 TNNANVEELLKDRDGMLVELRENLEIAQAQMKKAADKSRRDVAFE 1478


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  125 bits (314), Expect = 4e-27
 Identities = 55/105 (52%), Positives = 74/105 (70%)
 Frame = -2

Query: 315  RTLEQYLRCMASDRPREWGKWLPWAEYWYNTTYHAGLKCSPFKVLYGRDPPTLLRYKPDS 136
            R LE YLRC     PR W KWLPWAE+ YNT+ H   K SPFKVLYGRDPP ++R     
Sbjct: 1348 RALETYLRCFVGGHPRSWAKWLPWAEFSYNTSPHTSTKMSPFKVLYGRDPPHVVRAPKGQ 1407

Query: 135  TGIQAVEQMLQEREEILDEVRMNLLKAQLRMKQQADSSRRDDVFE 1
            T ++++E MLQ+R+ I+D++++NL++AQ RMK  AD SR +  F+
Sbjct: 1408 TSVESLEAMLQDRDAIIDDLQVNLVRAQQRMKHYADGSRTEVEFQ 1452


>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score =  124 bits (311), Expect = 8e-27
 Identities = 53/105 (50%), Positives = 76/105 (72%)
 Frame = -2

Query: 315  RTLEQYLRCMASDRPREWGKWLPWAEYWYNTTYHAGLKCSPFKVLYGRDPPTLLRYKPDS 136
            +TLE YLRCM +D P+ W KWLP AE+WYNTT+H+ +KC+PF+++YG+ PP  L Y P  
Sbjct: 1315 KTLETYLRCMTADAPQTWSKWLPLAEWWYNTTFHSAIKCTPFEIVYGQPPPVHLPYLPGE 1374

Query: 135  TGIQAVEQMLQEREEILDEVRMNLLKAQLRMKQQADSSRRDDVFE 1
            +    V++ LQ+REE++  ++ +LL+AQ RMKQ ADS R    F+
Sbjct: 1375 SSSVVVDRSLQKREELIAMLKFHLLRAQNRMKQYADSHRSQREFQ 1419


>dbj|BAG72154.1| hypothetical protein [Lotus japonicus]
          Length = 1558

 Score =  123 bits (309), Expect = 1e-26
 Identities = 52/105 (49%), Positives = 73/105 (69%)
 Frame = -2

Query: 315  RTLEQYLRCMASDRPREWGKWLPWAEYWYNTTYHAGLKCSPFKVLYGRDPPTLLRYKPDS 136
            R +E YLRC+   +P++W KWL WAE+WYNT YH+ +K +PFK LYGR+PP + +     
Sbjct: 1279 RCVETYLRCVTGSKPKQWPKWLSWAEFWYNTNYHSAIKTTPFKALYGREPPVIFKGNDSL 1338

Query: 135  TGIQAVEQMLQEREEILDEVRMNLLKAQLRMKQQADSSRRDDVFE 1
            T +  VE++  ER  IL+E++ NL KAQ RM+QQA+  RRD  +E
Sbjct: 1339 TSVDEVEKLTAERNLILEELKSNLEKAQNRMRQQANKHRRDVQYE 1383


>dbj|BAG72152.1| hypothetical protein [Lotus japonicus]
          Length = 1369

 Score =  123 bits (309), Expect = 1e-26
 Identities = 52/105 (49%), Positives = 73/105 (69%)
 Frame = -2

Query: 315  RTLEQYLRCMASDRPREWGKWLPWAEYWYNTTYHAGLKCSPFKVLYGRDPPTLLRYKPDS 136
            R +E YLRC+   +P++W KWL WAE+WYNT YH+ +K +PFK LYGR+PP + +     
Sbjct: 1090 RCVETYLRCVTGSKPKQWPKWLSWAEFWYNTNYHSAIKTTPFKALYGREPPVIFKGNDSL 1149

Query: 135  TGIQAVEQMLQEREEILDEVRMNLLKAQLRMKQQADSSRRDDVFE 1
            T +  VE++  ER  IL+E++ NL KAQ RM+QQA+  RRD  +E
Sbjct: 1150 TSVDEVEKLTAERNLILEELKSNLEKAQNRMRQQANKHRRDVQYE 1194


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