BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054543
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    67   4e-14
emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]    57   8e-13
emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]    55   5e-12
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    60   1e-11
gb|AAD39272.1|AC007203_4 Similar to retrotransposon polyprotein ...    54   8e-11

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 67.0 bits (162), Expect(2) = 4e-14
 Identities = 31/64 (48%), Positives = 43/64 (67%)
 Frame = +2

Query: 5    FKA*YGCDPPRINRSTMGRTKVQSLEDQLQERDAILDEFKAQLIKAQHRMKQQEDRQRRE 184
            FK  YG DPP + R+  G+T V+SLE  LQ+RDAI+D+ +  L++AQ RMK   D  R E
Sbjct: 1389 FKVLYGRDPPHVVRAPKGQTSVESLEAMLQDRDAIIDDLQVNLVRAQQRMKHYADGSRTE 1448

Query: 185  VDLR 196
            V+ +
Sbjct: 1449 VEFQ 1452



 Score = 35.4 bits (80), Expect(2) = 4e-14
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = +1

Query: 190  FEVGDWAYLKLQSYRQKSVATRAIQKL 270
            F+VGD  +L+LQ YRQ+S+A R  +KL
Sbjct: 1451 FQVGDAVFLRLQPYRQRSLAKRPFEKL 1477


>emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]
          Length = 1259

 Score = 57.4 bits (137), Expect(2) = 8e-13
 Identities = 28/62 (45%), Positives = 39/62 (62%)
 Frame = +2

Query: 5    FKA*YGCDPPRINRSTMGRTKVQSLEDQLQERDAILDEFKAQLIKAQHRMKQQEDRQRRE 184
            F+A YG  PP I    +G   ++ L+DQ+  RD +L E KA L  A +RMKQ  D++RRE
Sbjct: 1100 FQALYGXPPPAIPSYEIGSCPIEELDDQMTARDELLQELKAHLHAANNRMKQAADKKRRE 1159

Query: 185  VD 190
            V+
Sbjct: 1160 VN 1161



 Score = 40.8 bits (94), Expect(2) = 8e-13
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = +1

Query: 190  FEVGDWAYLKLQSYRQKSVATRAIQKL 270
            FEVGDW YL+LQ YRQ+SV  R   KL
Sbjct: 1162 FEVGDWVYLRLQPYRQQSVFRRTSHKL 1188


>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score = 54.7 bits (130), Expect(2) = 5e-12
 Identities = 27/62 (43%), Positives = 39/62 (62%)
 Frame = +2

Query: 5    FKA*YGCDPPRINRSTMGRTKVQSLEDQLQERDAILDEFKAQLIKAQHRMKQQEDRQRRE 184
            F+A YG  PP I    +G   ++ L+DQ+  R+ +L E KA L  A +RMKQ  D++RRE
Sbjct: 1129 FQALYGRPPPAIPSYEIGSCPIEELDDQMTARNELLQELKAHLHAANNRMKQAADKKRRE 1188

Query: 185  VD 190
            V+
Sbjct: 1189 VN 1190



 Score = 40.8 bits (94), Expect(2) = 5e-12
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = +1

Query: 190  FEVGDWAYLKLQSYRQKSVATRAIQKL 270
            FEVGDW YL+LQ YRQ+SV  R   KL
Sbjct: 1191 FEVGDWVYLRLQPYRQQSVFRRTSHKL 1217


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 60.5 bits (145), Expect(2) = 1e-11
 Identities = 30/61 (49%), Positives = 39/61 (63%)
 Frame = +2

Query: 5    FKA*YGCDPPRINRSTMGRTKVQSLEDQLQERDAILDEFKAQLIKAQHRMKQQEDRQRRE 184
            F+  YG  PP + R     T V +LEDQL  RDA+LDE K  L+ AQ+ M+ QED+ RRE
Sbjct: 1158 FEVVYGRPPPPLYRYKRNSTAVAALEDQLLVRDAVLDELKLHLVTAQNNMRTQEDKHRRE 1217

Query: 185  V 187
            +
Sbjct: 1218 M 1218



 Score = 33.9 bits (76), Expect(2) = 1e-11
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = +1

Query: 190  FEVGDWAYLKLQSYRQKSVATRAIQKL 270
            F VGD  YL+LQ Y+Q+S+A R  +KL
Sbjct: 1220 FGVGDMVYLRLQPYKQRSLAKRLNEKL 1246


>gb|AAD39272.1|AC007203_4 Similar to retrotransposon polyprotein [Arabidopsis thaliana]
          Length = 1264

 Score = 53.9 bits (128), Expect(2) = 8e-11
 Identities = 28/61 (45%), Positives = 38/61 (62%)
 Frame = +2

Query: 5    FKA*YGCDPPRINRSTMGRTKVQSLEDQLQERDAILDEFKAQLIKAQHRMKQQEDRQRRE 184
            FK  YG DPP + R  +G T    LE QL+ERD +L+  +A L +AQ  MK+  D +RR+
Sbjct: 994  FKVVYGRDPPSLVRFELGSTDNWDLEVQLKERDLMLEHIRANLQRAQEIMKRNADMKRRD 1053

Query: 185  V 187
            V
Sbjct: 1054 V 1054



 Score = 37.4 bits (85), Expect(2) = 8e-11
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = +1

Query: 190  FEVGDWAYLKLQSYRQKSVATRAIQKL 270
            F VGDW +LKLQ YRQ++V  R   KL
Sbjct: 1056 FAVGDWVHLKLQPYRQRTVVRRPCYKL 1082