BLASTX nr result

ID: Atractylodes22_contig00054407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054407
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    68   7e-10
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    64   1e-08
gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK...    64   1e-08
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    63   3e-08
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    55   6e-06

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/81 (45%), Positives = 58/81 (71%)
 Frame = -2

Query: 251 LRVLLLADGEEVDEEGEIRRVEAETDEEQGDNGECHALELYGISYSSTTLKTIKLMGKIR 72
           LRVL+L + EE + EG++  VE + DEE+GD GE   +E + + +S    ++IKLMG I+
Sbjct: 131 LRVLVLEEDEEGEPEGKLLAVEVD-DEEEGD-GEMCMMEFFHLGHSRP--QSIKLMGVIK 186

Query: 71  GIPTLILIDSGDTHNFLSKRL 9
            +P ++L+DSG THNF+S++L
Sbjct: 187 EVPVVVLVDSGATHNFISQQL 207


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
 Frame = -2

Query: 254  TLRVLLLADGEEVDEEGEIRRVEAET---DEEQGDNGECHALELYGISYSSTTLKTIKLM 84
            +LRVL+L +GE V+EEGEI  +E +    +EE+    EC  + + G   S     T+K+ 
Sbjct: 959  SLRVLILGEGEGVNEEGEIVSLETQEVLEEEEEEIESECKVIGVLG---SMGEYNTMKIG 1015

Query: 83   GKIRGIPTLILIDSGDTHNFLSKRL 9
            GK+  I  ++L+DSG THNF+S +L
Sbjct: 1016 GKLENIDVVVLVDSGATHNFISAKL 1040


>gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK46949.1| unknown
           [Medicago truncatula]
          Length = 185

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
 Frame = -2

Query: 254 TLRVLLLADGEEVDEEGEIRRVEAET---DEEQGDNGECHALELYGISYSSTTLKTIKLM 84
           +LRVL+L +GE V+EEGEI  +E +    +EE+    EC  + + G   S     T+K+ 
Sbjct: 28  SLRVLILGEGEGVNEEGEIVSLETQEVLEEEEEEIESECKVIGVLG---SMGEYNTMKIG 84

Query: 83  GKIRGIPTLILIDSGDTHNFLSKRL 9
           GK+  I  ++L+DSG THNF+S +L
Sbjct: 85  GKLENIDVVVLVDSGATHNFISAKL 109


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
 Frame = -2

Query: 251 LRVLLLADGEEVDEEGEIRRVEA-ETDEEQGDNGECHALELYGISYSSTTLKTIKLMGKI 75
           LRVL+L +GE +++EGEI  +EA + D E+    EC ++ + G   S    +T+K+ GKI
Sbjct: 335 LRVLILGEGEALNDEGEIMAMEAVQPDSEEEIEVECKSMGVLG---SMGEHRTMKIEGKI 391

Query: 74  RGIPTLILIDSGDTHNFLSKRL 9
             +  L+LIDSG +HNF+S ++
Sbjct: 392 ENVDVLVLIDSGASHNFISPQV 413


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
 Frame = -2

Query: 251 LRVLLLADGEEVDEEGEI---RRVEAETDEEQGDNGECHALELYGISYSSTTLKTIKLMG 81
           LRVL+L +GE + +EGEI   + V  E++EE     EC   +L G+  S     T+++ G
Sbjct: 351 LRVLILGEGETMTKEGEIVSMKDVTVESEEEV--EVEC---KLMGVLGSMGESHTMRVEG 405

Query: 80  KIRGIPTLILIDSGDTHNFLSKRL 9
           KI  +  L+LIDSG +HNF+S ++
Sbjct: 406 KIHNVDLLVLIDSGASHNFISPKV 429


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