BLASTX nr result

ID: Atractylodes22_contig00054349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054349
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    62   7e-11
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    62   9e-11
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    59   7e-10

>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 62.0 bits (149), Expect(2) = 7e-11
 Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
 Frame = -2

Query: 264 RIRLAQLSMVGAAQHWFTIVKEVYPDLDWAQLTQEL-QRFSGLEIQNPFEQLATLTQVGS 88
           R++LA+LSM G+  HWF ++ E   +L W  L + L  R+ G  ++NPFE+L+TL Q GS
Sbjct: 105 RVKLARLSMEGSTIHWFNLLMETEDELSWENLKRALIARYGGRRLENPFEELSTLRQKGS 164

Query: 87  ISDY 76
           + ++
Sbjct: 165 VEEF 168



 Score = 29.6 bits (65), Expect(2) = 7e-11
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -3

Query: 74  DEFEYLLSLVPRLPETQSLGYFVA 3
           + FE L S V RLPE Q LGYF++
Sbjct: 170 EAFELLSSQVGRLPEEQYLGYFMS 193


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 61.6 bits (148), Expect(2) = 9e-11
 Identities = 26/64 (40%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = -2

Query: 264 RIRLAQLSMVGAAQHWFTIVKEVYPDLDWAQLTQEL-QRFSGLEIQNPFEQLATLTQVGS 88
           R++LA+LSM G+  HWF ++ E   +L W +L + L  R+ G  ++NPFE+L+T+ Q GS
Sbjct: 88  RVKLARLSMEGSTIHWFNLLMETEDELSWEKLKRALIARYGGRRLENPFEELSTIRQKGS 147

Query: 87  ISDY 76
           + ++
Sbjct: 148 VEEF 151



 Score = 29.6 bits (65), Expect(2) = 9e-11
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -3

Query: 74  DEFEYLLSLVPRLPETQSLGYFVA 3
           + FE L S V RLPE Q LGYF++
Sbjct: 153 EAFELLSSQVGRLPEEQYLGYFMS 176


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355502480|gb|AES83683.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 58.5 bits (140), Expect(2) = 7e-10
 Identities = 26/64 (40%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
 Frame = -2

Query: 264 RIRLAQLSMVGAAQHWFTIVKEVYPDLDWAQLTQEL-QRFSGLEIQNPFEQLATLTQVGS 88
           R++L++LSM G   HWF ++ E   DL   +L + L  R+ G  ++NPFE+L+TL Q+GS
Sbjct: 778 RVKLSRLSMEGPTIHWFNLLMETEDDLSREKLKKALIARYDGRRLENPFEELSTLRQIGS 837

Query: 87  ISDY 76
           + ++
Sbjct: 838 VEEF 841



 Score = 29.6 bits (65), Expect(2) = 7e-10
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -3

Query: 74  DEFEYLLSLVPRLPETQSLGYFVA 3
           + FE L S V RLPE Q LGYF++
Sbjct: 843 EAFELLSSQVGRLPEEQYLGYFMS 866


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