BLASTX nr result

ID: Atractylodes22_contig00054329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054329
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]            97   1e-18
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]          94   9e-18
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]             91   1e-16
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...    91   1e-16
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]    90   2e-16

>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 56/96 (58%), Positives = 63/96 (65%), Gaps = 7/96 (7%)
 Frame = -1

Query: 268  DDERALL-------VIGSLMYVMVYTRPDLAHSVGVVSRFLSNPDRPHCDPVKFILRYLN 110
            DDER  +        +GSLMY MV TRPD+AH+VGVVSRFLSNP + H D VK+ILRYL 
Sbjct: 1101 DDERRKMERIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGKEHWDAVKWILRYLR 1160

Query: 109  GTMSHGLIFGNNDNYDLVGFCDFDYARDRDRGKSTS 2
            GT    L FG  DN  LVG+ D D A D D  KSTS
Sbjct: 1161 GTSKLCLCFG-EDNPVLVGYTDADMAGDVDSRKSTS 1195


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 51/81 (62%), Positives = 56/81 (69%)
 Frame = -1

Query: 244  IGSLMYVMVYTRPDLAHSVGVVSRFLSNPDRPHCDPVKFILRYLNGTMSHGLIFGNNDNY 65
            +GSLMY MV TRPD+AH+VGVVSRFLSNP R H D VK+ILRYL GT S  L FG     
Sbjct: 1113 VGSLMYAMVCTRPDIAHAVGVVSRFLSNPGREHWDAVKWILRYLRGTSSLSLCFGTGKPI 1172

Query: 64   DLVGFCDFDYARDRDRGKSTS 2
             L G+ D D A D D  KSTS
Sbjct: 1173 -LTGYTDSDMAGDIDTRKSTS 1192


>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = -1

Query: 247 VIGSLMYVMVYTRPDLAHSVGVVSRFLSNPDRPHCDPVKFILRYLNGTMSHGLIFGNNDN 68
           V+GSLMY MV TRPD+AH+VG+VSR+L+NP + H + VK+ILRYL GT +  L FG  + 
Sbjct: 474 VVGSLMYAMVCTRPDIAHAVGLVSRYLANPSKVHWEAVKWILRYLRGTSNLSLCFGGGEP 533

Query: 67  YDLVGFCDFDYARDRDRGKSTS 2
             L GF D D A D D  KSTS
Sbjct: 534 I-LEGFTDADMAGDLDNRKSTS 554


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/104 (43%), Positives = 66/104 (63%), Gaps = 5/104 (4%)
 Frame = -1

Query: 304  RISERDTKLVTKDDERALLV-----IGSLMYVMVYTRPDLAHSVGVVSRFLSNPDRPHCD 140
            ++   + K + +D E   LV     IGS+MY M+ +RPDLA+ VGVVSRF+S P + H  
Sbjct: 1103 KLRAANEKTLARDAEYMKLVPYPNAIGSIMYSMIGSRPDLAYPVGVVSRFMSKPSKEHWQ 1162

Query: 139  PVKFILRYLNGTMSHGLIFGNNDNYDLVGFCDFDYARDRDRGKS 8
             VK+++RY+ GT    L F  +D +++ G+CD DYA D DR +S
Sbjct: 1163 AVKWVMRYMKGTQDTCLRFKKDDKFEIRGYCDSDYATDLDRRRS 1206


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 54/106 (50%), Positives = 66/106 (62%), Gaps = 5/106 (4%)
 Frame = -1

Query: 304  RISERDTKLVTKDDERALLV-----IGSLMYVMVYTRPDLAHSVGVVSRFLSNPDRPHCD 140
            ++S R +    K+ E    V     IGSLMY MV TRPD+A++VGVVSRFLSNP R H +
Sbjct: 1061 KLSSRHSPSTDKEKEDMRRVPYASAIGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWE 1120

Query: 139  PVKFILRYLNGTMSHGLIFGNNDNYDLVGFCDFDYARDRDRGKSTS 2
             VK+I+RYL GT    L FG+     LVG+ D D A D D  KSTS
Sbjct: 1121 AVKWIMRYLRGTSKLKLTFGSGKPI-LVGYTDSDMAGDVDNRKSTS 1165


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