BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054321
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   135   5e-30
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   119   2e-25
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   119   2e-25
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocar...   115   4e-24

>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
           sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
           QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
           1-like [Cucumis sativus]
          Length = 1469

 Score =  135 bits (339), Expect = 5e-30
 Identities = 63/145 (43%), Positives = 98/145 (67%), Gaps = 6/145 (4%)
 Frame = +3

Query: 6   EVAQLLNKICPGCKNIKKDK-AKKTGLAPPIQILKICKYCDKNLRDVYPPTKFKVSTKDV 182
           EVAQ+LNK+CPGCK+++++   K           K C+YC  +L+D YPP +FK+ST D+
Sbjct: 89  EVAQVLNKVCPGCKSVRQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDM 148

Query: 183 FGQSTIIAEIKSS-----RKLTSDNGLPPDYWDFVPNDHQQDDAFSTFSRRVLTHAQVYE 347
           F +S I+ E+K +     +K  +  GLP DYWDF+P D QQ++++   +R++LTHAQV+ 
Sbjct: 149 FKKSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHY 208

Query: 348 ILKDVDPSYLKGYLGKKNKIFLQSF 422
           +LKD+DP +LK ++   + +FL SF
Sbjct: 209 LLKDIDPKFLKKFVPAIDSLFLNSF 233


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
           subunit 1-like [Vitis vinifera]
          Length = 1560

 Score =  119 bits (299), Expect = 2e-25
 Identities = 62/142 (43%), Positives = 91/142 (64%), Gaps = 6/142 (4%)
 Frame = +3

Query: 6   EVAQLLNKICPGCKNIKKDKAKKTGLAPPIQIL-KICKYCDKNLRDVYPPTKFKVSTKDV 182
           EV Q+LNKICPGCK+ ++ +  K   +   ++  K CKYC  N  D YP  KFKVS+KD+
Sbjct: 122 EVVQILNKICPGCKSTRQGQWVKGADSGSRRLRSKGCKYCAANSNDWYPTMKFKVSSKDL 181

Query: 183 FGQSTIIAEI-----KSSRKLTSDNGLPPDYWDFVPNDHQQDDAFSTFSRRVLTHAQVYE 347
           F ++ II E+     K  +K +    LP DYWDF+P D QQ++     +RRVL+HAQV+ 
Sbjct: 182 FRKTAIIVEMNEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHY 241

Query: 348 ILKDVDPSYLKGYLGKKNKIFL 413
           +LKD+DP ++K ++ + +  FL
Sbjct: 242 LLKDIDPGFIKEFVSRMDSFFL 263


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  119 bits (299), Expect = 2e-25
 Identities = 62/142 (43%), Positives = 91/142 (64%), Gaps = 6/142 (4%)
 Frame = +3

Query: 6   EVAQLLNKICPGCKNIKKDKAKKTGLAPPIQIL-KICKYCDKNLRDVYPPTKFKVSTKDV 182
           EV Q+LNKICPGCK+ ++ +  K   +   ++  K CKYC  N  D YP  KFKVS+KD+
Sbjct: 89  EVVQILNKICPGCKSTRQGQWVKGADSGSRRLRSKGCKYCAANSNDWYPTMKFKVSSKDL 148

Query: 183 FGQSTIIAEI-----KSSRKLTSDNGLPPDYWDFVPNDHQQDDAFSTFSRRVLTHAQVYE 347
           F ++ II E+     K  +K +    LP DYWDF+P D QQ++     +RRVL+HAQV+ 
Sbjct: 149 FRKTAIIVEMNEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHY 208

Query: 348 ILKDVDPSYLKGYLGKKNKIFL 413
           +LKD+DP ++K ++ + +  FL
Sbjct: 209 LLKDIDPGFIKEFVSRMDSFFL 230


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  119 bits (298), Expect = 3e-25
 Identities = 62/141 (43%), Positives = 88/141 (62%), Gaps = 5/141 (3%)
 Frame = +3

Query: 6   EVAQLLNKICPGCKNIKKDKAKKTGLAPPIQILKICKYCDKNLRDVYPPTKFKVSTKDVF 185
           EV Q+LNKICPGCK+ ++ +  K          K CKYC  N  D YP  KFKVS+KD+F
Sbjct: 89  EVVQILNKICPGCKSTRQGQWVKVRRLRS----KGCKYCAANSNDWYPTMKFKVSSKDLF 144

Query: 186 GQSTIIAEI-----KSSRKLTSDNGLPPDYWDFVPNDHQQDDAFSTFSRRVLTHAQVYEI 350
            ++ II E+     K  +K +    LP DYWDF+P D QQ++     +RRVL+HAQV+ +
Sbjct: 145 RKTAIIVEMNEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHYL 204

Query: 351 LKDVDPSYLKGYLGKKNKIFL 413
           LKD+DP ++K ++ + +  FL
Sbjct: 205 LKDIDPGFIKEFVSRMDSFFL 225


>ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocarpa]
           gi|222845329|gb|EEE82876.1| RNA polymerase IV subunit
           [Populus trichocarpa]
          Length = 1517

 Score =  115 bits (288), Expect = 4e-24
 Identities = 65/145 (44%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
 Frame = +3

Query: 6   EVAQLLNKICPGCKNIKKDKAKKTGLAPPIQILKICKYCDKNLRDVYPPTKFKVSTKDVF 185
           EV Q+LNKICPGCK+I+  KA +       Q  K CKYC  N    YPP KFKVS+K++F
Sbjct: 118 EVVQILNKICPGCKSIRLAKATELITKENPQ-RKGCKYCAGNSLGWYPPMKFKVSSKEIF 176

Query: 186 GQSTIIAEIKSSRKLTSDNG----LPPDYWDFVPNDHQQDDAFSTF--SRRVLTHAQVYE 347
            ++ IIAEI+ +       G    L  DYWD  P D Q+++  +    +RRVL+H+QV  
Sbjct: 177 RKTAIIAEIRETLSKKPQKGFKKILAADYWDIFPKDEQEEEEETNAKPNRRVLSHSQVRH 236

Query: 348 ILKDVDPSYLKGYLGKKNKIFLQSF 422
           +LKDVDP+++K  + K + IFL  F
Sbjct: 237 MLKDVDPNFIKLSILKTDTIFLNCF 261