BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054318
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAZ40333.1| hypothetical protein [Raphanus sativus]                80   1e-13
gb|ABF96581.1| retrotransposon protein, putative, Ty3-gypsy subc...    61   8e-08
gb|AAS07051.1| retrotransposon protein, putative, Ty3-gypsy sub-...    61   8e-08
gb|AAX95158.1| retrotransposon protein, putative, Ty3-gypsy sub-...    59   4e-07
ref|XP_004168787.1| PREDICTED: LOW QUALITY PROTEIN: protein stra...    58   7e-07

>emb|CAZ40333.1| hypothetical protein [Raphanus sativus]
          Length = 785

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/82 (48%), Positives = 52/82 (63%)
 Frame = -1

Query: 342 LTKDCFPAHEYNKLKARKIGLVPISERINAKAYRLQLPPHVHTSDVFNVKHLIPYHGDDS 163
           LTK+  P  +YNKLK++K+G V + ERIN   YR++LP H+ TSDVFN+KHL P+ GD+ 
Sbjct: 707 LTKERLPLRDYNKLKSKKLGPVEVVERINPNVYRVRLPSHLRTSDVFNIKHLSPFKGDND 766

Query: 162 RTTTMHSDSRVNLLPPGEDDVA 97
                  DS  N   PG  D A
Sbjct: 767 -----DPDSWANPSQPGGPDAA 783


>gb|ABF96581.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1211

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/84 (41%), Positives = 44/84 (52%)
 Frame = -1

Query: 342  LTKDCFPAHEYNKLKARKIGLVPISERINAKAYRLQLPPHVHTSDVFNVKHLIPYHGDDS 163
            L KD FP    +KL  R  GL  I E+IN  AY+L+LPP    S  FN+  L PY G++ 
Sbjct: 1023 LRKDRFPELRKSKLMPRADGLFKIVEKINDNAYKLELPPEFGVSPTFNISDLKPYLGEED 1082

Query: 162  RTTTMHSDSRVNLLPPGEDDVAIT 91
                   +SR   +  GEDD  IT
Sbjct: 1083 EL-----ESRTTSIQEGEDDADIT 1101


>gb|AAS07051.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group]
          Length = 1223

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/84 (41%), Positives = 44/84 (52%)
 Frame = -1

Query: 342  LTKDCFPAHEYNKLKARKIGLVPISERINAKAYRLQLPPHVHTSDVFNVKHLIPYHGDDS 163
            L KD FP    +KL  R  GL  I E+IN  AY+L+LPP    S  FN+  L PY G++ 
Sbjct: 1035 LRKDRFPELRKSKLMPRADGLFKIVEKINDNAYKLELPPEFGVSPTFNISDLKPYLGEED 1094

Query: 162  RTTTMHSDSRVNLLPPGEDDVAIT 91
                   +SR   +  GEDD  IT
Sbjct: 1095 EL-----ESRTTSIQEGEDDADIT 1113


>gb|AAX95158.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|77549568|gb|ABA92365.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1182

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/83 (40%), Positives = 43/83 (51%)
 Frame = -1

Query: 339  TKDCFPAHEYNKLKARKIGLVPISERINAKAYRLQLPPHVHTSDVFNVKHLIPYHGDDSR 160
            TKD FP    +KL  R  G   I E+IN  AY+L+LPP    S  FN+  L PY G++  
Sbjct: 1008 TKDRFPELRKSKLMPRADGPFKIVEKINDNAYKLELPPKFGVSPTFNISDLKPYLGEEDE 1067

Query: 159  TTTMHSDSRVNLLPPGEDDVAIT 91
                  +SR   +  GEDD  IT
Sbjct: 1068 L-----ESRTTSIQEGEDDADIT 1085


>ref|XP_004168787.1| PREDICTED: LOW QUALITY PROTEIN: protein strawberry notch homolog
           1-like, partial [Cucumis sativus]
          Length = 750

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/59 (47%), Positives = 34/59 (57%)
 Frame = -1

Query: 342 LTKDCFPAHEYNKLKARKIGLVPISERINAKAYRLQLPPHVHTSDVFNVKHLIPYHGDD 166
           L K  FP   YNKLK R+IG  PI E+    A+++ LP  +H   VFNV  L PYH  D
Sbjct: 4   LKKSRFPTGTYNKLKDRQIGPFPILEKYGDNAFKIDLPQDIHIHPVFNVADLKPYHAPD 62