BLASTX nr result

ID: Atractylodes22_contig00054304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054304
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15512.3| unnamed protein product [Vitis vinifera]              109   2e-22
emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]   109   2e-22
ref|XP_002521455.1| pentatricopeptide repeat-containing protein,...   107   1e-21
ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20

>emb|CBI15512.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  109 bits (273), Expect = 2e-22
 Identities = 49/80 (61%), Positives = 65/80 (81%)
 Frame = -2

Query: 241 EAHKLFHRVIQIGLNPDVYSYNTLIYGYINKGMMQEARTLLHDMIREGVPPNEFTCSVLV 62
           EAH+LFHR++  GL+PD+ +YNTLI+GY  +G MQE+R+LLHDMI  G+ P+ FTC VLV
Sbjct: 346 EAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLV 405

Query: 61  EGYRKKNMLISAVNLIVELQ 2
           EGY K+   +SA+NL+VELQ
Sbjct: 406 EGYGKEGKFLSALNLVVELQ 425


>emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
          Length = 676

 Score =  109 bits (273), Expect = 2e-22
 Identities = 49/80 (61%), Positives = 65/80 (81%)
 Frame = -2

Query: 241 EAHKLFHRVIQIGLNPDVYSYNTLIYGYINKGMMQEARTLLHDMIREGVPPNEFTCSVLV 62
           EAH+LFHR++  GL+PD+ +YNTLI+GY  +G MQE+R+LLHDMI  G+ P+ FTC VLV
Sbjct: 391 EAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLV 450

Query: 61  EGYRKKNMLISAVNLIVELQ 2
           EGY K+   +SA+NL+VELQ
Sbjct: 451 EGYGKEGKFLSALNLVVELQ 470


>ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539354|gb|EEF40945.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 623

 Score =  107 bits (266), Expect = 1e-21
 Identities = 47/80 (58%), Positives = 66/80 (82%)
 Frame = -2

Query: 241 EAHKLFHRVIQIGLNPDVYSYNTLIYGYINKGMMQEARTLLHDMIREGVPPNEFTCSVLV 62
           EAH+LFHR+I  GLNPD+ S+NTLI GY  +G M+E+R+LLH+MI  G+ P++ TC VL+
Sbjct: 337 EAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLI 396

Query: 61  EGYRKKNMLISAVNLIVELQ 2
           EGYRK+  ++SA+NL+VEL+
Sbjct: 397 EGYRKEARIVSALNLVVELE 416


>ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 636

 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/80 (60%), Positives = 63/80 (78%)
 Frame = -2

Query: 241 EAHKLFHRVIQIGLNPDVYSYNTLIYGYINKGMMQEARTLLHDMIREGVPPNEFTCSVLV 62
           EAH+LFHR+I  G++PDV  YNTLI  Y   GM+QEAR+LLH+MI  G+ P+ FTC +LV
Sbjct: 348 EAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILV 407

Query: 61  EGYRKKNMLISAVNLIVELQ 2
           EGY ++  LISA+NL+VE+Q
Sbjct: 408 EGYGREGRLISALNLVVEIQ 427


>ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 632

 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/80 (60%), Positives = 63/80 (78%)
 Frame = -2

Query: 241 EAHKLFHRVIQIGLNPDVYSYNTLIYGYINKGMMQEARTLLHDMIREGVPPNEFTCSVLV 62
           EAH+LFHR+I  G++PDV  YNTLI  Y   GM+QEAR+LLH+MI  G+ P+ FTC +LV
Sbjct: 344 EAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILV 403

Query: 61  EGYRKKNMLISAVNLIVELQ 2
           EGY ++  LISA+NL+VE+Q
Sbjct: 404 EGYGREGRLISALNLVVEIQ 423


Top