BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054296
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...    68   7e-10
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...    68   9e-10
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...    57   2e-06
gb|AAK52165.1|AC084831_19 putative polyprotein [Oryza sativa Jap...    57   2e-06
gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-...    55   8e-06

>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/88 (43%), Positives = 52/88 (59%)
 Frame = -3

Query: 266 DL*KVLANLDAYEMLTQLKVMF*QQIRQRRYEIVKVLRASEMVEDVSINVHVLRMKSLKD 87
           DL K   N++AY+M+  LK MF  Q R  R+EI K L   ++ E   ++ HV++M     
Sbjct: 90  DLQKQFENIEAYDMIVALKGMFETQARTERFEISKNLFGCKLAEGGPVSPHVIKMVGYTQ 149

Query: 86  QLEILRLTMPTELAKDLILSSLPKSYDQ 3
            LE L   +  ELA DLIL+SLP+SY Q
Sbjct: 150 SLEKLGFPLSQELATDLILASLPESYGQ 177


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/88 (42%), Positives = 53/88 (60%)
 Frame = -3

Query: 266 DL*KVLANLDAYEMLTQLKVMF*QQIRQRRYEIVKVLRASEMVEDVSINVHVLRMKSLKD 87
           DL K   N++AY+M+  LK MF  Q R +R+EI K L + ++ E   ++ H+++M     
Sbjct: 173 DLQKQFENIEAYDMIVALKGMFETQARTKRFEISKNLFSCKLAEGSPVSPHMIKMVGYTQ 232

Query: 86  QLEILRLTMPTELAKDLILSSLPKSYDQ 3
            LE L   +  ELA DLIL+SLP SY Q
Sbjct: 233 SLEKLGFPLSQELATDLILASLPASYGQ 260


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/79 (39%), Positives = 46/79 (58%)
 Frame = -3

Query: 242 LDAYEMLTQLKVMF*QQIRQRRYEIVKVLRASEMVEDVSINVHVLRMKSLKDQLEILRLT 63
           LDA+ ++T L+ MF  Q R +R+   K L A  + E   ++ HV++M    + LE L   
Sbjct: 94  LDAHTIITGLRNMFEDQARAKRFNTSKSLFACRLAEGNPVSPHVIKMIGYNETLEKLGFP 153

Query: 62  MPTELAKDLILSSLPKSYD 6
           +  ELA DLIL SLP S++
Sbjct: 154 LSQELATDLILQSLPPSFE 172


>gb|AAK52165.1|AC084831_19 putative polyprotein [Oryza sativa Japonica Group]
           gi|108709282|gb|ABF97077.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 262

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/79 (37%), Positives = 47/79 (59%)
 Frame = -3

Query: 242 LDAYEMLTQLKVMF*QQIRQRRYEIVKVLRASEMVEDVSINVHVLRMKSLKDQLEILRLT 63
           LDA+ ++T L+ MF  Q R  R+  +K L A  + E   +++HV++M    + L+ L   
Sbjct: 94  LDAHTIITGLRNMFEDQARAERFNTLKSLFACRLAEGNPVSLHVIKMIGYTESLDKLGCP 153

Query: 62  MPTELAKDLILSSLPKSYD 6
           +  ELA DLIL SLP S++
Sbjct: 154 LSRELATDLILQSLPPSFE 172


>gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77550176|gb|ABA92973.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 591

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/79 (37%), Positives = 45/79 (56%)
 Frame = -3

Query: 242 LDAYEMLTQLKVMF*QQIRQRRYEIVKVLRASEMVEDVSINVHVLRMKSLKDQLEILRLT 63
           LDA+ ++T L+ MF  Q R  R+   K L A  + E   ++ HV++M    + L+ L   
Sbjct: 116 LDAHTIITGLRNMFEDQARAERFNTSKSLFACRLAEGNPVSPHVIKMIGYTESLDKLGFP 175

Query: 62  MPTELAKDLILSSLPKSYD 6
           +  ELA DLIL SLP S++
Sbjct: 176 LSRELATDLILQSLPPSFE 194