BLASTX nr result

ID: Atractylodes22_contig00054281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054281
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX96565.1| retrotransposon protein, putative, Ty1-copia sub-...   112   3e-23
gb|ABA93735.1| retrotransposon protein, putative, unclassified [...   110   1e-22
gb|ADB85329.1| putative retrotransposon protein [Phyllostachys e...   110   1e-22
gb|ABA93940.1| retrotransposon protein, putative, Ty1-copia subc...   110   2e-22
gb|ABA91128.1| retrotransposon protein, putative, unclassified [...   110   2e-22

>gb|AAX96565.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77552672|gb|ABA95469.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 709

 Score =  112 bits (280), Expect = 3e-23
 Identities = 50/74 (67%), Positives = 63/74 (85%)
 Frame = -1

Query: 280 FCDNTSAIAIANNPVFHSRTKHIDVRYHFIRDHIMKGDIELHFILTNNQLADLFTKPLDE 101
           FCDNTSAI IA NPV HSRTKHID+R+HF+RDH+ KGD+EL F+ TN Q+AD+FTKPLD 
Sbjct: 631 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTNLQIADIFTKPLDS 690

Query: 100 SRFNYLIRELGMLN 59
           +RF +L  ELG+++
Sbjct: 691 NRFAFLRGELGIIH 704


>gb|ABA93735.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 842

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/74 (68%), Positives = 62/74 (83%)
 Frame = -1

Query: 280 FCDNTSAIAIANNPVFHSRTKHIDVRYHFIRDHIMKGDIELHFILTNNQLADLFTKPLDE 101
           FCDNTSAI IA NPV HSRTKHID+R+HF+RDH+ KGDIEL F+ T  QLAD+FTKPLD 
Sbjct: 764 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDIELMFLDTKLQLADIFTKPLDS 823

Query: 100 SRFNYLIRELGMLN 59
           +RF +L  ELG+++
Sbjct: 824 NRFAFLRGELGIIH 837


>gb|ADB85329.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 338

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/73 (69%), Positives = 61/73 (83%)
 Frame = -1

Query: 280 FCDNTSAIAIANNPVFHSRTKHIDVRYHFIRDHIMKGDIELHFILTNNQLADLFTKPLDE 101
           FCDNTSAI IA NPV HSRTKHID+RYHF+RDH+ KGDI L F+ ++ QLAD+FTKPLD 
Sbjct: 261 FCDNTSAINIAKNPVQHSRTKHIDIRYHFLRDHVEKGDIVLQFVESDRQLADIFTKPLDS 320

Query: 100 SRFNYLIRELGML 62
           SRF+ L  ELG++
Sbjct: 321 SRFSALRGELGVV 333


>gb|ABA93940.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1508

 Score =  110 bits (274), Expect = 2e-22
 Identities = 49/74 (66%), Positives = 62/74 (83%)
 Frame = -1

Query: 280  FCDNTSAIAIANNPVFHSRTKHIDVRYHFIRDHIMKGDIELHFILTNNQLADLFTKPLDE 101
            FCDNTSAI IA NPV HSRTKHID+R+HF+RDH+ KGD+EL F+ T  Q+AD+FTKPLD 
Sbjct: 1430 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 1489

Query: 100  SRFNYLIRELGMLN 59
            +RF +L  ELG+++
Sbjct: 1490 NRFAFLRGELGVIH 1503


>gb|ABA91128.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1258

 Score =  110 bits (274), Expect = 2e-22
 Identities = 49/74 (66%), Positives = 62/74 (83%)
 Frame = -1

Query: 280  FCDNTSAIAIANNPVFHSRTKHIDVRYHFIRDHIMKGDIELHFILTNNQLADLFTKPLDE 101
            FCDNTSAI IA NPV HSRTKHID+R+HF+RDH+ KGD+EL F+ T  Q+AD+FTKPLD 
Sbjct: 1180 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 1239

Query: 100  SRFNYLIRELGMLN 59
            +RF +L  ELG+++
Sbjct: 1240 NRFAFLRGELGIIH 1253


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