BLASTX nr result

ID: Atractylodes22_contig00054262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054262
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   123   2e-26
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   123   2e-26
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   117   1e-24
emb|CAJ65870.1| putative integrase [Cucumis melo]                     115   5e-24
emb|CAJ65876.1| putative integrase [Cucumis melo]                     114   6e-24

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/85 (68%), Positives = 74/85 (87%)
 Frame = -2

Query: 256  EGLPRSQGLDSILVVVDQLTKYAHFLGLKHPFIAQSVATIFIKEIVRLHSFPSIIVSDRD 77
            EGLP S+G+D+ILV+VD+L+KYAHFL L+HPF A  VA +F+KE+VRLH FPS IVSDRD
Sbjct: 1251 EGLPVSKGVDTILVIVDRLSKYAHFLTLRHPFTALMVADLFVKEVVRLHGFPSSIVSDRD 1310

Query: 76   KLFMSSVFWREIFRLHGTTLLRSRA 2
            ++F+ S+FW+E+FRLHGTTL RS A
Sbjct: 1311 RIFL-SLFWKELFRLHGTTLKRSSA 1334


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/85 (70%), Positives = 73/85 (85%)
 Frame = -2

Query: 256  EGLPRSQGLDSILVVVDQLTKYAHFLGLKHPFIAQSVATIFIKEIVRLHSFPSIIVSDRD 77
            EGLP+SQG D+ILVVVD+L+KYAHF+ LKHPF A +VA +FIKEIV+LH FPS IVSDRD
Sbjct: 1184 EGLPKSQGWDTILVVVDRLSKYAHFITLKHPFTAPTVAAVFIKEIVKLHGFPSTIVSDRD 1243

Query: 76   KLFMSSVFWREIFRLHGTTLLRSRA 2
            K+FM S+FW+E+F+L GT L RS A
Sbjct: 1244 KVFM-SLFWKELFKLQGTLLHRSTA 1267


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/85 (65%), Positives = 71/85 (83%)
 Frame = -2

Query: 256  EGLPRSQGLDSILVVVDQLTKYAHFLGLKHPFIAQSVATIFIKEIVRLHSFPSIIVSDRD 77
            EGLP+S G DSILVVVD+L+KY HF+GL+HPF A +VA +FIKE+V+LH FP+ IVSDRD
Sbjct: 1020 EGLPKSGGWDSILVVVDRLSKYGHFIGLRHPFSAATVAQVFIKEVVKLHGFPTTIVSDRD 1079

Query: 76   KLFMSSVFWREIFRLHGTTLLRSRA 2
            K+FM S+FW+E+F+L  T L RS A
Sbjct: 1080 KVFM-SIFWKELFKLQRTLLHRSTA 1103


>emb|CAJ65870.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/85 (65%), Positives = 70/85 (82%)
 Frame = -2

Query: 256 EGLPRSQGLDSILVVVDQLTKYAHFLGLKHPFIAQSVATIFIKEIVRLHSFPSIIVSDRD 77
           EGLPRS+G D+ILVVVD+L+KYAHF+ L HPF A+ VA +FIKE+VRLH +P  IVSDRD
Sbjct: 49  EGLPRSKGFDTILVVVDRLSKYAHFITLGHPFSAKVVALVFIKEVVRLHGYPRSIVSDRD 108

Query: 76  KLFMSSVFWREIFRLHGTTLLRSRA 2
           ++F+S  FW+E+FRL GT L RS A
Sbjct: 109 RVFLSH-FWQELFRLQGTQLKRSTA 132


>emb|CAJ65876.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/85 (64%), Positives = 70/85 (82%)
 Frame = -2

Query: 256 EGLPRSQGLDSILVVVDQLTKYAHFLGLKHPFIAQSVATIFIKEIVRLHSFPSIIVSDRD 77
           EGLPRS+G D+ILVVVD+L+KYAHF+ L HPF A+ VA +F+KE+VRLH +P  IVSDRD
Sbjct: 49  EGLPRSKGFDTILVVVDRLSKYAHFITLGHPFSAKVVALVFVKEVVRLHGYPRSIVSDRD 108

Query: 76  KLFMSSVFWREIFRLHGTTLLRSRA 2
           ++F+S  FW+E+FRL GT L RS A
Sbjct: 109 RVFLSH-FWQELFRLQGTQLKRSTA 132


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