BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054260
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-...    58   2e-11
ref|XP_002519884.1| replication factor A 1, rfa1, putative [Rici...    68   9e-10
ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-...    61   8e-08
ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-...    61   8e-08
gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila]    47   2e-07

>ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Glycine max]
          Length = 894

 Score = 57.8 bits (138), Expect(2) = 2e-11
 Identities = 22/36 (61%), Positives = 26/36 (72%)
 Frame = +3

Query: 189 SGDCYKCHQSGHWARDCPGVSNVLPPYGSERVASGR 296
           SG+C+KCHQ+GHWARDCPG+S     YGS     GR
Sbjct: 847 SGECFKCHQTGHWARDCPGLSAAPSSYGSANAMQGR 882



 Score = 35.8 bits (81), Expect(2) = 2e-11
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +2

Query: 2   SGVPSGGRNTATSVLCYKCHQLGHWARD 85
           +G+  GG     SV CYKCHQ GH+ARD
Sbjct: 802 AGLGGGG---GASVECYKCHQSGHYARD 826


>ref|XP_002519884.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223540930|gb|EEF42488.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 901

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = +3

Query: 177 NTAASGDCYKCHQSGHWARDCPGVSNVLPPYGSERVASGR 296
           +  A G+CYKCHQ GHWARDCPG++N+ P YGS  ++SGR
Sbjct: 839 SAGAGGECYKCHQVGHWARDCPGLNNIPPAYGSTAISSGR 878


>ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
           partial [Cucumis sativus]
          Length = 425

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 22/35 (62%), Positives = 29/35 (82%)
 Frame = +3

Query: 171 GQNTAASGDCYKCHQSGHWARDCPGVSNVLPPYGS 275
           G +   SG+C+KCHQ+GHWARDCPG++NV P YG+
Sbjct: 385 GPSGGTSGECFKCHQTGHWARDCPGLANVPPAYGN 419


>ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 861

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 22/35 (62%), Positives = 29/35 (82%)
 Frame = +3

Query: 171 GQNTAASGDCYKCHQSGHWARDCPGVSNVLPPYGS 275
           G +   SG+C+KCHQ+GHWARDCPG++NV P YG+
Sbjct: 821 GPSGGTSGECFKCHQTGHWARDCPGLANVPPAYGN 855


>gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila]
          Length = 369

 Score = 46.6 bits (109), Expect(2) = 2e-07
 Identities = 20/49 (40%), Positives = 31/49 (63%)
 Frame = +3

Query: 174 QNTAASGDCYKCHQSGHWARDCPGVSNVLPPYGSERVASGRTASGMPVG 320
           +++++SG+CYKC + GHWARDC G S      G+++  SG+  S    G
Sbjct: 295 KSSSSSGECYKCGKQGHWARDCTGQS------GNQQFQSGQAKSTSSAG 337



 Score = 33.1 bits (74), Expect(2) = 2e-07
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 23  RNTATSVLCYKCHQLGHWARD 85
           R+T+ +  CYKC + GHWARD
Sbjct: 259 RSTSAAGECYKCGKQGHWARD 279



 Score = 43.9 bits (102), Expect(2) = 2e-06
 Identities = 16/31 (51%), Positives = 23/31 (74%)
 Frame = +3

Query: 147 NSQRHA*VGQNTAASGDCYKCHQSGHWARDC 239
           N Q  +   ++T+++GDCYKC + GHWARDC
Sbjct: 322 NQQFQSGQAKSTSSAGDCYKCGKPGHWARDC 352



 Score = 32.7 bits (73), Expect(2) = 2e-06
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 11  PSGGRNTATSVLCYKCHQLGHWARD 85
           P   +++++S  CYKC + GHWARD
Sbjct: 291 PGKVKSSSSSGECYKCGKQGHWARD 315



 Score = 44.3 bits (103), Expect(2) = 3e-06
 Identities = 19/43 (44%), Positives = 28/43 (65%)
 Frame = +3

Query: 174 QNTAASGDCYKCHQSGHWARDCPGVSNVLPPYGSERVASGRTA 302
           ++T+A+G+CYKC + GHWARDC   S   P Y   +V S  ++
Sbjct: 259 RSTSAAGECYKCGKQGHWARDCTAQSG-NPTYEPGKVKSSSSS 300



 Score = 31.6 bits (70), Expect(2) = 3e-06
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +2

Query: 35  TSVLCYKCHQLGHWARDFAL 94
           T   CYKC + GHWARD  L
Sbjct: 227 TGTPCYKCGKEGHWARDCTL 246