BLASTX nr result

ID: Atractylodes22_contig00054246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054246
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group]                162   3e-38
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group...   162   3e-38
gb|ABA93844.2| retrotransposon protein, putative, unclassified [...   160   8e-38
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc...   160   1e-37
ref|XP_002489193.1| hypothetical protein SORBIDRAFT_0013s009070 ...   160   1e-37

>emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group]
          Length = 811

 Score =  162 bits (409), Expect = 3e-38
 Identities = 77/94 (81%), Positives = 85/94 (90%)
 Frame = -1

Query: 284 STSGYCVFLGDNLLSWSSKRQQTISRSSAEAEYRGVANVVAETAWLRNLLRELHSPLSIA 105
           STSGY VFLGDNL+SWSSKRQ T+SRSSAEAEYR VAN VAE  WLR LL+ELHSP S A
Sbjct: 676 STSGYAVFLGDNLVSWSSKRQHTVSRSSAEAEYRAVANAVAEVTWLRQLLQELHSPPSRA 735

Query: 104 TLVYCDNVSAIYLSANPVQHQRTKYIEIDIHFVR 3
           TLVYCDNVSA+YLS+NPVQHQRTK++EID+HFVR
Sbjct: 736 TLVYCDNVSAVYLSSNPVQHQRTKHVEIDLHFVR 769


>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1679

 Score =  162 bits (409), Expect = 3e-38
 Identities = 77/94 (81%), Positives = 85/94 (90%)
 Frame = -1

Query: 284  STSGYCVFLGDNLLSWSSKRQQTISRSSAEAEYRGVANVVAETAWLRNLLRELHSPLSIA 105
            STSGY VFLGDNL+SWSSKRQ T+SRSSAEAEYR VAN VAE  WLR LL+ELHSP S A
Sbjct: 1544 STSGYAVFLGDNLVSWSSKRQHTVSRSSAEAEYRAVANAVAEVTWLRQLLQELHSPPSRA 1603

Query: 104  TLVYCDNVSAIYLSANPVQHQRTKYIEIDIHFVR 3
            TLVYCDNVSA+YLS+NPVQHQRTK++EID+HFVR
Sbjct: 1604 TLVYCDNVSAVYLSSNPVQHQRTKHVEIDLHFVR 1637


>gb|ABA93844.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1099

 Score =  160 bits (406), Expect = 8e-38
 Identities = 76/94 (80%), Positives = 84/94 (89%)
 Frame = -1

Query: 284  STSGYCVFLGDNLLSWSSKRQQTISRSSAEAEYRGVANVVAETAWLRNLLRELHSPLSIA 105
            STSGY VFLGDNL+SWSSKRQ T+SRSSAEAEYR +AN VAET WLR LL ELH+P S A
Sbjct: 964  STSGYAVFLGDNLVSWSSKRQHTVSRSSAEAEYRAMANAVAETCWLRQLLHELHTPPSKA 1023

Query: 104  TLVYCDNVSAIYLSANPVQHQRTKYIEIDIHFVR 3
            TLVYCDNVSA+YLS NPVQHQRTK++EID+HFVR
Sbjct: 1024 TLVYCDNVSAVYLSTNPVQHQRTKHVEIDLHFVR 1057


>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1597

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/94 (80%), Positives = 85/94 (90%)
 Frame = -1

Query: 284  STSGYCVFLGDNLLSWSSKRQQTISRSSAEAEYRGVANVVAETAWLRNLLRELHSPLSIA 105
            STSGY VFLGDNL+SWSSKRQ T+SRSSAEAEYR VAN VAE +WLR LL ELHSP S A
Sbjct: 1452 STSGYAVFLGDNLVSWSSKRQNTVSRSSAEAEYRAVANAVAEASWLRQLLHELHSPPSKA 1511

Query: 104  TLVYCDNVSAIYLSANPVQHQRTKYIEIDIHFVR 3
            TLVYCDNVSA+YLS+NPVQHQRTK+++ID+HFVR
Sbjct: 1512 TLVYCDNVSAVYLSSNPVQHQRTKHVKIDLHFVR 1545


>ref|XP_002489193.1| hypothetical protein SORBIDRAFT_0013s009070 [Sorghum bicolor]
           gi|241947143|gb|EES20288.1| hypothetical protein
           SORBIDRAFT_0013s009070 [Sorghum bicolor]
          Length = 1219

 Score =  160 bits (405), Expect = 1e-37
 Identities = 74/94 (78%), Positives = 86/94 (91%)
 Frame = -1

Query: 284 STSGYCVFLGDNLLSWSSKRQQTISRSSAEAEYRGVANVVAETAWLRNLLRELHSPLSIA 105
           STSGYCVFLGDNL+SWSSKRQ T+SRSSAEAEYR VA+ VAET WLR LL+ELH+P+S A
Sbjct: 635 STSGYCVFLGDNLVSWSSKRQTTVSRSSAEAEYRAVAHAVAETCWLRQLLQELHAPISSA 694

Query: 104 TLVYCDNVSAIYLSANPVQHQRTKYIEIDIHFVR 3
           T+VYCDNVSA+Y++ NPV H+RTK+IEIDIHFVR
Sbjct: 695 TIVYCDNVSAVYMTQNPVHHRRTKHIEIDIHFVR 728



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/93 (43%), Positives = 61/93 (65%)
 Frame = +3

Query: 6    DKMYVDLNIFGPLMLNWIGRQVYGTNIVTVYKGCNGQWRV*LAKKVTKPCSLSHDICNAP 185
            D++ VDL++ GPLML+ +G +V+ T++V V +   G+  V L K++ +P SLSH +C++ 
Sbjct: 784  DEVKVDLHMLGPLMLDQVGGEVHRTDVVAVDQCAPGERAVELGKELPEPGSLSHAVCHSA 843

Query: 186  VFSLGTRTGDSLLALRRPRQEIVSQKDTVT*SR 284
            VF LGT  GD  LA  RP  ++ +QKD V   R
Sbjct: 844  VFRLGTGAGDDRLAFGRPEHQVAAQKDGVAGGR 876


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