BLASTX nr result

ID: Atractylodes22_contig00054236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054236
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ32483.1| hypothetical protein [Nicotiana tabacum] gi|7779...    39   5e-07
ref|YP_004891645.1| unnamed protein product (chloroplast) [Nicot...    39   7e-07
dbj|BAE48041.1| hypothetical protein [Nicotiana tomentosiformis]       38   8e-07

>emb|CAJ32483.1| hypothetical protein [Nicotiana tabacum]
           gi|77799603|dbj|BAE46692.1| hypothetical protein
           [Nicotiana sylvestris]
          Length = 79

 Score = 38.9 bits (89), Expect(3) = 5e-07
 Identities = 23/41 (56%), Positives = 27/41 (65%)
 Frame = +3

Query: 162 SEKL*TNDRTEIEIERVNIRPRKLYFLGLLNVGQSNTIKSK 284
           SEK   N   EI IERVNIRPRKL+   L N+GQ N  ++K
Sbjct: 38  SEKSRVNPTNEIGIERVNIRPRKLFL--LQNLGQYNKGQNK 76



 Score = 36.6 bits (83), Expect(3) = 5e-07
 Identities = 17/24 (70%), Positives = 18/24 (75%)
 Frame = +1

Query: 100 K*IRMIH*SGWRNRPETNSSIRKS 171
           K I MIH SGWRN PE NS IR+S
Sbjct: 15  KGILMIHWSGWRNEPEINSCIRRS 38



 Score = 22.3 bits (46), Expect(3) = 5e-07
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +2

Query: 59  MGTMEPVNSKDSSE 100
           MGT E VN+KDS E
Sbjct: 1   MGTTELVNAKDSIE 14


>ref|YP_004891645.1| unnamed protein product (chloroplast) [Nicotiana undulata]
           gi|347453932|gb|AEO95590.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347454043|gb|AEO95700.1| hypothetical protein
           [synthetic construct]
          Length = 79

 Score = 38.9 bits (89), Expect(3) = 7e-07
 Identities = 23/41 (56%), Positives = 27/41 (65%)
 Frame = +3

Query: 162 SEKL*TNDRTEIEIERVNIRPRKLYFLGLLNVGQSNTIKSK 284
           SEK   N   EI IERVNIRPRKL+   L N+GQ N  ++K
Sbjct: 38  SEKSRVNPTNEIGIERVNIRPRKLFL--LQNLGQYNKGQNK 76



 Score = 36.2 bits (82), Expect(3) = 7e-07
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +1

Query: 100 K*IRMIH*SGWRNRPETNSSIRKS 171
           K I M+H SGWRN PE NS IR+S
Sbjct: 15  KGILMVHWSGWRNEPEINSCIRRS 38



 Score = 22.3 bits (46), Expect(3) = 7e-07
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +2

Query: 59  MGTMEPVNSKDSSE 100
           MGT E VN+KDS E
Sbjct: 1   MGTTELVNAKDSIE 14


>dbj|BAE48041.1| hypothetical protein [Nicotiana tomentosiformis]
          Length = 79

 Score = 38.1 bits (87), Expect(3) = 8e-07
 Identities = 23/41 (56%), Positives = 27/41 (65%)
 Frame = +3

Query: 162 SEKL*TNDRTEIEIERVNIRPRKLYFLGLLNVGQSNTIKSK 284
           SEK   N   EI IERVNIRPRKL+   L N+GQ N  ++K
Sbjct: 38  SEKSRVNPINEIGIERVNIRPRKLFL--LQNLGQYNKGQNK 76



 Score = 36.6 bits (83), Expect(3) = 8e-07
 Identities = 17/24 (70%), Positives = 18/24 (75%)
 Frame = +1

Query: 100 K*IRMIH*SGWRNRPETNSSIRKS 171
           K I MIH SGWRN PE NS IR+S
Sbjct: 15  KGILMIHWSGWRNEPEINSCIRRS 38



 Score = 22.3 bits (46), Expect(3) = 8e-07
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +2

Query: 59  MGTMEPVNSKDSSE 100
           MGT E VN+KDS E
Sbjct: 1   MGTTELVNAKDSIE 14


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