BLASTX nr result

ID: Atractylodes22_contig00054233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054233
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516959.1| conserved hypothetical protein [Ricinus comm...    67   1e-09
ref|XP_003547386.1| PREDICTED: uncharacterized protein LOC100786...    63   2e-08
ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_004161085.1| PREDICTED: condensin-2 complex subunit H2-li...    60   2e-07
ref|XP_003534838.1| PREDICTED: condensin-2 complex subunit H2-li...    60   2e-07

>ref|XP_002516959.1| conserved hypothetical protein [Ricinus communis]
           gi|223544047|gb|EEF45573.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 667

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
 Frame = -3

Query: 194 YMDEDFMH--MDDTTQFDKKVPF---EPDPHVNREDLCYSHLDSVLASIVETEKQTAIAA 30
           YMDED  H  +  +T FD    F   +P    + EDLC SHLD++LA+I ETEKQT +A 
Sbjct: 423 YMDEDLHHEKVGSSTHFDINEAFGNEDPSSQASLEDLCRSHLDALLANIAETEKQTELAT 482

Query: 29  RVSNWKHRI 3
           RVS+WK +I
Sbjct: 483 RVSSWKQKI 491


>ref|XP_003547386.1| PREDICTED: uncharacterized protein LOC100786571 [Glycine max]
          Length = 674

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
 Frame = -3

Query: 197 AYMDEDFMHMDDTTQFDKKVPFEPDPHVNR-----EDLCYSHLDSVLASIVETEKQTAIA 33
           AYM+ED     +  +FD      PD  V+      EDLC SHL+++LASI ETEKQT +A
Sbjct: 421 AYMEEDLPPFSNEHEFDD-AHINPDEAVDLSQASLEDLCRSHLNALLASIAETEKQTEMA 479

Query: 32  ARVSNWKHRI 3
           ARVS WK RI
Sbjct: 480 ARVSTWKQRI 489


>ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|222838580|gb|EEE76945.1|
           predicted protein [Populus trichocarpa]
          Length = 645

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
 Frame = -3

Query: 194 YMDEDF-----MHMDDTTQFDKKVPF---EPDPHVNREDLCYSHLDSVLASIVETEKQTA 39
           Y DEDF      H D  T FD    F   +     + EDLC SHLD++LA+I ETEKQT 
Sbjct: 423 YKDEDFPPPREKHDDGATCFDTYKDFGHGDQSSQASLEDLCRSHLDALLANIAETEKQTE 482

Query: 38  IAARVSNWKHRI 3
           +A RVS+WK +I
Sbjct: 483 LATRVSSWKQKI 494


>ref|XP_004161085.1| PREDICTED: condensin-2 complex subunit H2-like [Cucumis sativus]
          Length = 622

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/58 (53%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
 Frame = -3

Query: 167 DDTTQFDKKVPFEP---DPHVNREDLCYSHLDSVLASIVETEKQTAIAARVSNWKHRI 3
           D    FD    +EP   D   + EDLC SHLD++LASI ETEKQT +A RVS WK  I
Sbjct: 439 DAAAHFDNGEAYEPEFPDSRSSLEDLCRSHLDALLASIAETEKQTEMATRVSTWKQNI 496


>ref|XP_003534838.1| PREDICTED: condensin-2 complex subunit H2-like [Glycine max]
          Length = 673

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
 Frame = -3

Query: 197 AYMDEDFMHMDDTTQFDKKVPFEPDPHVNR-----EDLCYSHLDSVLASIVETEKQTAIA 33
           AYM+ED     +  +FD      PD  V+      EDLC SHL+++LASI ETEKQT +A
Sbjct: 420 AYMEEDLPSFSNEHEFDD-AHVNPDEAVDLSQTSLEDLCRSHLNALLASIAETEKQTEMA 478

Query: 32  ARVSNWKHRI 3
            RVS WK +I
Sbjct: 479 TRVSAWKQKI 488


Top