BLASTX nr result

ID: Atractylodes22_contig00054232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054232
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   101   7e-20
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   101   7e-20
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,...   100   2e-19
ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18

>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/119 (45%), Positives = 68/119 (57%)
 Frame = +2

Query: 5   LDHENXXXXXXXXXXXGRPSEALNLLDFLKEHAPGSHHIVTEALIVILCKSNQLDAALDE 184
           LD EN           GR  EA  LLDFL+EH+ GSH ++ EALI++LCK++QL  AL E
Sbjct: 603 LDRENLLSILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALRE 662

Query: 185 YRKXXXXXXXXXXXXXXXXLIKGCEEAELFSEASQVLSDMTFIGVRPSKAIYTSLALMY 361
           Y K                L+  CEE ELF+EASQ+ SDM F GV PS  +Y S+ + Y
Sbjct: 663 YGKARDFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTY 721


>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/119 (45%), Positives = 68/119 (57%)
 Frame = +2

Query: 5   LDHENXXXXXXXXXXXGRPSEALNLLDFLKEHAPGSHHIVTEALIVILCKSNQLDAALDE 184
           LD EN           GR  EA  LLDFL+EH+ GSH ++ EALI++LCK++QL  AL E
Sbjct: 635 LDRENLLSILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALRE 694

Query: 185 YRKXXXXXXXXXXXXXXXXLIKGCEEAELFSEASQVLSDMTFIGVRPSKAIYTSLALMY 361
           Y K                L+  CEE ELF+EASQ+ SDM F GV PS  +Y S+ + Y
Sbjct: 695 YGKARDFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTY 753


>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1429

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 55/119 (46%), Positives = 68/119 (57%)
 Frame = +2

Query: 5   LDHENXXXXXXXXXXXGRPSEALNLLDFLKEHAPGSHHIVTEALIVILCKSNQLDAALDE 184
           +D EN           GR +EAL+LL FLK H   S+ +V EA IV LCK+ QLDAAL E
Sbjct: 591 IDSENLLSILSSYSSSGRQAEALDLLQFLKGHVSKSNQLVAEASIVTLCKAKQLDAALKE 650

Query: 185 YRKXXXXXXXXXXXXXXXXLIKGCEEAELFSEASQVLSDMTFIGVRPSKAIYTSLALMY 361
           Y                  LI+ CEE E  +EASQ+ SDM F GV+PSK++Y S+ LMY
Sbjct: 651 YNDTREFDWFTGSCTMYESLIQCCEENEFTAEASQIFSDMRFNGVKPSKSLYRSMVLMY 709


>ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|222852729|gb|EEE90276.1|
           predicted protein [Populus trichocarpa]
          Length = 1480

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 54/119 (45%), Positives = 73/119 (61%)
 Frame = +2

Query: 5   LDHENXXXXXXXXXXXGRPSEALNLLDFLKEHAPGSHHIVTEALIVILCKSNQLDAALDE 184
           +D EN           GR +EAL+LL+FLKEH+P S  ++TEAL+V+LCK+ QLDAAL E
Sbjct: 635 IDRENLLSILSSYSSSGRHAEALDLLEFLKEHSPRSSQMITEALVVMLCKAQQLDAALKE 694

Query: 185 YRKXXXXXXXXXXXXXXXXLIKGCEEAELFSEASQVLSDMTFIGVRPSKAIYTSLALMY 361
           Y                  LI+ C E EL +EASQV SDM F G++ S+++Y S+ L+Y
Sbjct: 695 Y-SNNRELGFTGSFTMFESLIQCCLENELITEASQVFSDMRFCGIKASESLYESMVLLY 752


>ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|222837354|gb|EEE75733.1|
           predicted protein [Populus trichocarpa]
          Length = 1450

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 53/119 (44%), Positives = 69/119 (57%)
 Frame = +2

Query: 5   LDHENXXXXXXXXXXXGRPSEALNLLDFLKEHAPGSHHIVTEALIVILCKSNQLDAALDE 184
           +D EN           GR S AL+LL+ LKEH P S  ++TEAL+V+LCK+ QLD AL E
Sbjct: 637 IDRENLLSILSSYSSSGRHSVALDLLELLKEHTPRSSQMITEALVVMLCKAQQLDTALKE 696

Query: 185 YRKXXXXXXXXXXXXXXXXLIKGCEEAELFSEASQVLSDMTFIGVRPSKAIYTSLALMY 361
           Y                  LI+ C E ELF+EASQV SDM F G++ S+ +Y S+ L+Y
Sbjct: 697 Y-SNSRELGFTGSFTMFEALIQCCLENELFTEASQVFSDMRFCGIKASECLYQSMMLLY 754


Top