BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054148
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892169.1| pentatricopeptide repeat-containing protein ...    69   3e-10
ref|NP_171855.1| pentatricopeptide repeat-containing protein [Ar...    67   2e-09
emb|CBI28908.3| unnamed protein product [Vitis vinifera]               66   3e-09
dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]            65   6e-09
ref|XP_002532772.1| pentatricopeptide repeat-containing protein,...    65   7e-09

>ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338011|gb|EFH68428.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 662

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
 Frame = -2

Query: 279 MRKTVLKSLYPIIIYRPHSSSINGGRKIYYPVHNSPEPDSNLLFISNPR----WVFTATS 112
           MR+   K     ++ RPH SS +      Y   +    DS  L +S+ R    WVF ++S
Sbjct: 1   MRRFYRKPFSLALLNRPHCSSQS---LCLYKNGDFLSDDSKCLPLSSSRTSVRWVFNSSS 57

Query: 111 PPPPEWVQPINDTSNLITSHP--KPSPWVDQILNLLD 7
            PPPEW++P ND S+L+ S+   +PSPWV QILNLLD
Sbjct: 58  LPPPEWIEPFNDVSDLVKSNRNLQPSPWVSQILNLLD 94


>ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g03560, mitochondrial; Flags: Precursor
           gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18
           [Arabidopsis thaliana] gi|332189465|gb|AEE27586.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 660

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
 Frame = -2

Query: 279 MRKTVLKSLYPIIIYRPHSSSINGGRKIYYPVHNSPEPDSNLLFISNPR----WVFTATS 112
           MR+   K     ++ RPH SS +      Y   +    DS    +S+ R    WVF ++S
Sbjct: 1   MRRFYRKPFSVPLLNRPHCSSQS---HCLYKNGDFLSDDSKCSPLSSSRTSVRWVFNSSS 57

Query: 111 PPPPEWVQPINDTSNLITSHPK--PSPWVDQILNLLD 7
            PPPEW++P ND S+L+ S+    PSPWV QILNLLD
Sbjct: 58  LPPPEWIEPFNDVSDLVKSNRNLLPSPWVSQILNLLD 94


>emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 11/102 (10%)
 Frame = -2

Query: 279 MRKTVLKSLYPIIIYRPHSSS-----INGGRKIYYPVHNSPEPDSNLLFI-----SNPRW 130
           MRKT++K      +  P  S       N G  I++P H  P P ++ L       SN RW
Sbjct: 1   MRKTLIKRFSQAHLLLPFHSPQPPCPYNSG--IFHP-HLRPPPHASKLGSTSTVGSNSRW 57

Query: 129 VFTATSPPPPEWVQPINDTSNLITS-HPKPSPWVDQILNLLD 7
           VFT  +P PPEWV+P+ D S+L ++  P+PSPWV+QIL LLD
Sbjct: 58  VFT--TPIPPEWVEPLYDLSDLASNPQPQPSPWVNQILKLLD 97


>dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
          Length = 642

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/45 (62%), Positives = 35/45 (77%), Gaps = 2/45 (4%)
 Frame = -2

Query: 135 RWVFTATSPPPPEWVQPINDTSNLITSHPK--PSPWVDQILNLLD 7
           RWVF ++S PPPEW++P ND S+L+ S+    PSPWV QILNLLD
Sbjct: 32  RWVFNSSSLPPPEWIEPFNDVSDLVKSNRNLLPSPWVSQILNLLD 76


>ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527482|gb|EEF29611.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 647

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
 Frame = -2

Query: 183 HNSPEPDSNLLFISNPRWVFTATSPPPPEWVQPINDTSNLIT-SHP--KPSPWVDQILNL 13
           +N+ E  S L   SN RWVFT+ S PPPEW+ P  D S++ + +H   KPSPWV+QIL L
Sbjct: 25  YNNGESLSKLCLTSNRRWVFTSNSLPPPEWIDPFVDLSDVASRTHQDLKPSPWVNQILAL 84

Query: 12  LD 7
           LD
Sbjct: 85  LD 86