BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054103
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16054.3| unnamed protein product [Vitis vinifera]               62   4e-08
ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi...    62   4e-08
ref|NP_190263.1| pentatricopeptide repeat-containing protein [Ar...    57   2e-06
ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containi...    56   3e-06
ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arab...    56   3e-06

>emb|CBI16054.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/90 (42%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
 Frame = -2

Query: 268 QAPPTIQQSHFPIRTRRPSPVYSHTRHXXXXXXXXXXXXXXXXXNHQ--IQSLCKKRHLK 95
           Q P TIQQ H P    +P+ +    +                  N+   IQSLCK+ +L 
Sbjct: 5   QTPQTIQQPHLPKPFHKPTAISPKPQCCLALRPSTTTRSNGDSNNNNPLIQSLCKQGNLN 64

Query: 94  QAIQALTQESNPTQRTYELLILSCAIAKSL 5
           QA+Q L+QE NPTQ TYELLILSC    SL
Sbjct: 65  QALQVLSQEPNPTQHTYELLILSCTRQNSL 94


>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/90 (42%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
 Frame = -2

Query: 268 QAPPTIQQSHFPIRTRRPSPVYSHTRHXXXXXXXXXXXXXXXXXNHQ--IQSLCKKRHLK 95
           Q P TIQQ H P    +P+ +    +                  N+   IQSLCK+ +L 
Sbjct: 5   QTPQTIQQPHLPKPFHKPTAISPKPQCCLALRPSTTTRSNGDSNNNNPLIQSLCKQGNLN 64

Query: 94  QAIQALTQESNPTQRTYELLILSCAIAKSL 5
           QA+Q L+QE NPTQ TYELLILSC    SL
Sbjct: 65  QALQVLSQEPNPTQHTYELLILSCTRQNSL 94


>ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g46790, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
           gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis
           thaliana] gi|110741961|dbj|BAE98921.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332644684|gb|AEE78205.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = -2

Query: 127 IQSLCKKRHLKQAIQALTQESNPTQRTYELLILSCAIAKSLS 2
           IQSLCK+  LKQAI+ L+QES+P+Q+TYELLIL C    SLS
Sbjct: 53  IQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLS 94


>ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449474033|ref|XP_004154055.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449510921|ref|XP_004163811.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 37/80 (46%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
 Frame = -2

Query: 235 PIRTRRP--SPVYSHTRHXXXXXXXXXXXXXXXXXNHQIQSLCKKRHLKQAIQALTQESN 62
           P  T  P  SP YS ++                  NH IQSLCK+ +LKQA+  L+ ESN
Sbjct: 7   PYSTHYPPSSPRYSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYLLSHESN 66

Query: 61  PTQRTYELLILSCAIAKSLS 2
           PTQ+T ELLILS A   SLS
Sbjct: 67  PTQQTCELLILSAARRNSLS 86


>ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata] gi|297323351|gb|EFH53772.1| hypothetical protein
           ARALYDRAFT_905886 [Arabidopsis lyrata subsp. lyrata]
          Length = 657

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/42 (64%), Positives = 34/42 (80%)
 Frame = -2

Query: 127 IQSLCKKRHLKQAIQALTQESNPTQRTYELLILSCAIAKSLS 2
           IQSLCK+  LKQA++ L+QES+P+Q+TYELLIL C    SLS
Sbjct: 53  IQSLCKEGKLKQALRVLSQESSPSQQTYELLILCCGHRSSLS 94