BLASTX nr result

ID: Atractylodes22_contig00054093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054093
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534178.1| hypothetical protein RCOM_0303160 [Ricinus c...    62   2e-07

>ref|XP_002534178.1| hypothetical protein RCOM_0303160 [Ricinus communis]
           gi|223525738|gb|EEF28202.1| hypothetical protein
           RCOM_0303160 [Ricinus communis]
          Length = 937

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 48/153 (31%), Positives = 66/153 (43%), Gaps = 27/153 (17%)
 Frame = -1

Query: 379 DGILAGVNERRLSDCFSLEDFHPLNSSVEIQHSCPFP----------------------- 269
           D  + G ++  LS+  S  +        EI HSCP P                       
Sbjct: 382 DENVTGASQNSLSEGLSDREVFSSELHHEIPHSCPLPSRAEINTEQQEMAPNAFNNHDVE 441

Query: 268 LGTNPSVEQLTTVEDCMK----FDLDRGEQPSLKGRHSSFNRRVSFSLDKMXXXXXXXXX 101
           L +N S    ++ E+ ++     D +  E  S KGRH S NRR SFSL +M         
Sbjct: 442 LSSNASSSANSSNENLLETLRTLDQETAELDSRKGRHPSPNRRFSFSLGRMTRSFSFKET 501

Query: 100 XXFPQLSSTYNSLKTRPVTFGSSPDLHNYNSKK 2
              PQL+STY S+K+ PV   +S DL N N +K
Sbjct: 502 SGIPQLTSTYVSVKSGPVISKASADLGNSNREK 534


Top