BLASTX nr result

ID: Atractylodes22_contig00054046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054046
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB85467.1| chloroplast omega-3 fatty acid desaturase [Brass...   138   4e-31
dbj|BAD94215.1| omega-3 fatty acid desaturase, chloroplast precu...   138   5e-31
gb|AAK63867.1|AF389295_1 AT3g11170/F9F8_4 [Arabidopsis thaliana]...   138   5e-31
ref|NP_187727.1| omega-3 fatty acid desaturase [Arabidopsis thal...   138   5e-31
gb|AAP78965.1| omega-3 fatty acid desaturase [Helianthus annuus]      137   7e-31

>emb|CAB85467.1| chloroplast omega-3 fatty acid desaturase [Brassica juncea]
          Length = 429

 Score =  138 bits (348), Expect = 4e-31
 Identities = 60/67 (89%), Positives = 63/67 (94%)
 Frame = +3

Query: 3   ERKDVITSTICWTTMAAVLVGLNFVVGPMQMLKLYGIPYWINVMWLDFVTYLHHHGHEDK 182
           ER DV+TST CWT MAA+LV LNFV+GPMQMLKLYGIPYWINVMWLDFVTYLHHHGHEDK
Sbjct: 257 ERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKLYGIPYWINVMWLDFVTYLHHHGHEDK 316

Query: 183 LPWYRGK 203
           LPWYRGK
Sbjct: 317 LPWYRGK 323


>dbj|BAD94215.1| omega-3 fatty acid desaturase, chloroplast precursor [Arabidopsis
           thaliana]
          Length = 206

 Score =  138 bits (347), Expect = 5e-31
 Identities = 59/67 (88%), Positives = 63/67 (94%)
 Frame = +3

Query: 3   ERKDVITSTICWTTMAAVLVGLNFVVGPMQMLKLYGIPYWINVMWLDFVTYLHHHGHEDK 182
           ERKDV+TST CWT MAA+LV LNF +GP+QMLKLYGIPYWINVMWLDFVTYLHHHGHEDK
Sbjct: 31  ERKDVLTSTACWTAMAALLVCLNFTIGPIQMLKLYGIPYWINVMWLDFVTYLHHHGHEDK 90

Query: 183 LPWYRGK 203
           LPWYRGK
Sbjct: 91  LPWYRGK 97


>gb|AAK63867.1|AF389295_1 AT3g11170/F9F8_4 [Arabidopsis thaliana] gi|20908084|gb|AAM26725.1|
           AT3g11170/F9F8_4 [Arabidopsis thaliana]
          Length = 446

 Score =  138 bits (347), Expect = 5e-31
 Identities = 59/67 (88%), Positives = 63/67 (94%)
 Frame = +3

Query: 3   ERKDVITSTICWTTMAAVLVGLNFVVGPMQMLKLYGIPYWINVMWLDFVTYLHHHGHEDK 182
           ERKDV+TST CWT MAA+LV LNF +GP+QMLKLYGIPYWINVMWLDFVTYLHHHGHEDK
Sbjct: 271 ERKDVLTSTACWTAMAALLVCLNFTIGPIQMLKLYGIPYWINVMWLDFVTYLHHHGHEDK 330

Query: 183 LPWYRGK 203
           LPWYRGK
Sbjct: 331 LPWYRGK 337


>ref|NP_187727.1| omega-3 fatty acid desaturase [Arabidopsis thaliana]
           gi|1169599|sp|P46310.1|FAD3C_ARATH RecName: Full=Omega-3
           fatty acid desaturase, chloroplastic; Flags: Precursor
           gi|6016681|gb|AAF01508.1|AC009991_4 omega-3 fatty acid
           desaturase, chloroplast precursor [Arabidopsis thaliana]
           gi|12321881|gb|AAG50977.1|AC073395_19 omega-3 fatty acid
           desaturase, chloroplast precursor; 37125-39292
           [Arabidopsis thaliana] gi|408481|gb|AAA61773.1| omega-3
           fatty acid desaturase [Arabidopsis thaliana]
           gi|468434|dbj|BAA05040.1| plastid fatty acid desaturase
           [Arabidopsis thaliana] gi|541653|dbj|BAA03106.1|
           omega-3-desaturase [Arabidopsis thaliana]
           gi|332641488|gb|AEE75009.1| omega-3 fatty acid
           desaturase [Arabidopsis thaliana]
          Length = 446

 Score =  138 bits (347), Expect = 5e-31
 Identities = 59/67 (88%), Positives = 63/67 (94%)
 Frame = +3

Query: 3   ERKDVITSTICWTTMAAVLVGLNFVVGPMQMLKLYGIPYWINVMWLDFVTYLHHHGHEDK 182
           ERKDV+TST CWT MAA+LV LNF +GP+QMLKLYGIPYWINVMWLDFVTYLHHHGHEDK
Sbjct: 271 ERKDVLTSTACWTAMAALLVCLNFTIGPIQMLKLYGIPYWINVMWLDFVTYLHHHGHEDK 330

Query: 183 LPWYRGK 203
           LPWYRGK
Sbjct: 331 LPWYRGK 337


>gb|AAP78965.1| omega-3 fatty acid desaturase [Helianthus annuus]
          Length = 443

 Score =  137 bits (346), Expect = 7e-31
 Identities = 61/67 (91%), Positives = 64/67 (95%)
 Frame = +3

Query: 3   ERKDVITSTICWTTMAAVLVGLNFVVGPMQMLKLYGIPYWINVMWLDFVTYLHHHGHEDK 182
           E+KDVITSTICWTTM A+L GLNFVVGP+QMLKLYGIPY INVMWLDFVTYLHHHGHEDK
Sbjct: 273 EQKDVITSTICWTTMLALLFGLNFVVGPVQMLKLYGIPYLINVMWLDFVTYLHHHGHEDK 332

Query: 183 LPWYRGK 203
           LPWYRGK
Sbjct: 333 LPWYRGK 339


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