BLASTX nr result

ID: Atractylodes22_contig00054003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054003
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...   137   7e-31
ref|XP_003549103.1| PREDICTED: uncharacterized protein LOC100777...   113   1e-23
ref|XP_003516363.1| PREDICTED: uncharacterized protein LOC100791...   107   8e-22
gb|AAT93941.1| putative polyprotein [Oryza sativa Japonica Group]      70   2e-10
emb|CAE05066.1| OSJNBa0094P09.5 [Oryza sativa Japonica Group] gi...    70   2e-10

>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/85 (75%), Positives = 76/85 (89%)
 Frame = +3

Query: 3   RVWGCRAVVRLPELKRKTLDEKGVECIFVGYAEHSKAYRFYTIEPSDSISVHTVIESRDA 182
           RVWGCRA+VRLP+ K KTL E+G++CIF+GYA HSKAYRFY IEP+DSI+VHTVIESRDA
Sbjct: 618 RVWGCRAIVRLPQPKIKTLGERGIDCIFIGYALHSKAYRFYVIEPNDSIAVHTVIESRDA 677

Query: 183 IFDETRFSSMARPKDLVLTSSGTKD 257
           IFDE RFS++ R KDLV +SSGTK+
Sbjct: 678 IFDENRFSTIPRQKDLVPSSSGTKE 702


>ref|XP_003549103.1| PREDICTED: uncharacterized protein LOC100777881 [Glycine max]
          Length = 1799

 Score =  113 bits (283), Expect = 1e-23
 Identities = 51/71 (71%), Positives = 65/71 (91%)
 Frame = +3

Query: 18  RAVVRLPELKRKTLDEKGVECIFVGYAEHSKAYRFYTIEPSDSISVHTVIESRDAIFDET 197
           RAVVRL ELKRKT+ E+G++CIF+GYAEHSKAYRFY +E +DS++V++VIESRDAIFDE 
Sbjct: 177 RAVVRLTELKRKTIGERGIDCIFIGYAEHSKAYRFYVLESNDSVAVNSVIESRDAIFDEQ 236

Query: 198 RFSSMARPKDL 230
           RF+S+ RPKD+
Sbjct: 237 RFTSIPRPKDM 247


>ref|XP_003516363.1| PREDICTED: uncharacterized protein LOC100791529 [Glycine max]
          Length = 1687

 Score =  107 bits (268), Expect = 8e-22
 Identities = 48/70 (68%), Positives = 63/70 (90%)
 Frame = +3

Query: 21  AVVRLPELKRKTLDEKGVECIFVGYAEHSKAYRFYTIEPSDSISVHTVIESRDAIFDETR 200
           A+VRL E KRKT+ E+G++CIF+GYAEHSKAYRFY +E +DS++V++VIESRDAIFDE R
Sbjct: 122 ALVRLTEPKRKTIGERGIDCIFIGYAEHSKAYRFYVLESNDSVAVNSVIESRDAIFDEQR 181

Query: 201 FSSMARPKDL 230
           F+S+ RPKD+
Sbjct: 182 FTSIPRPKDM 191


>gb|AAT93941.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1433

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 8/88 (9%)
 Frame = +3

Query: 3   RVWGCRAVVRLPELKRKTLDEKGVECIFVGYAEHSKAYRFYTIEPSDSISVH--TVIESR 176
           R WGC A V +P  K++ L  K V+C+F+GYA HS AYRF  ++ S+ + +H  T++ESR
Sbjct: 657 RTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVK-SEVLDMHVGTIMESR 715

Query: 177 DAIFDETRF------SSMARPKDLVLTS 242
           DA F E+ F      S   +P +++L+S
Sbjct: 716 DATFFESFFPMKDTHSGSNQPSEIILSS 743


>emb|CAE05066.1| OSJNBa0094P09.5 [Oryza sativa Japonica Group]
           gi|32492383|emb|CAE05129.1| OSJNBa0079F16.21 [Oryza
           sativa Japonica Group]
          Length = 849

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
 Frame = +3

Query: 3   RVWGCRAVVRLPELKRKTLDEKGVECIFVGYAEHSKAYRFYTIEPS-DSISVHTVIESRD 179
           R WGC A V +P  K++ L  K V+C+F GYA HS AYRF  ++     + V T++ESRD
Sbjct: 307 RTWGCLAKVNVPITKKRKLGSKTVDCVFPGYAHHSIAYRFLIVKSEVPDMYVGTIMESRD 366

Query: 180 AIFDETRF------SSMARPKDLVLTS 242
           AIF E+ F      SS ++P +++ +S
Sbjct: 367 AIFFESFFPMKDTHSSSSQPSEIIPSS 393


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