BLASTX nr result

ID: Atractylodes22_contig00053999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053999
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana] ...    87   1e-15
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    86   2e-15
gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thali...    72   4e-11
gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]               72   4e-11
ref|XP_002443134.1| hypothetical protein SORBIDRAFT_08g010845 [S...    72   5e-11

>ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177756|dbj|BAB11069.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008231|gb|AED95614.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 369

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 40/103 (38%), Positives = 60/103 (58%)
 Frame = -3

Query: 314 MCKGAKVMGHITGKSQPNSDDDEDWEAIDSRIKSWFYSTCEPNLLNIITKDNCTAKDLWE 135
           +C    V+GHI G S P    ++ W+  D  +K W Y T   +LL+ I K  CTA+DLW 
Sbjct: 43  LCLSFGVLGHIDGSSTPTPMTEKRWKERDGLVKMWIYGTITDSLLDTIIKVGCTARDLWL 102

Query: 134 ALDSYFLNNKLSRSLQLQTVFRNTKKGALSITDYCHTLKDIAD 6
           +L++ F +NK +R+LQ +   R T    LS+ +YC  LK ++D
Sbjct: 103 SLENLFRDNKEARALQFENELRTTTIDDLSVHEYCQKLKSLSD 145


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 36/102 (35%), Positives = 63/102 (61%)
 Frame = -3

Query: 311 CKGAKVMGHITGKSQPNSDDDEDWEAIDSRIKSWFYSTCEPNLLNIITKDNCTAKDLWEA 132
           C    V+GH+ G ++   +  ++W+  D  +K W Y T   ++++ + K N TA++LW A
Sbjct: 43  CVSFGVLGHLDGSTKSTPEIAKEWKERDGHVKMWIYGTISESIIDTVLKKNSTARELWLA 102

Query: 131 LDSYFLNNKLSRSLQLQTVFRNTKKGALSITDYCHTLKDIAD 6
           +++ FL+NK +R+LQL+   R    G LS+ DYC  +K++AD
Sbjct: 103 IETLFLDNKEARALQLENELRTMVIGDLSVHDYCKKMKNLAD 144


>gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 474

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/103 (33%), Positives = 53/103 (51%)
 Frame = -3

Query: 311 CKGAKVMGHITGKSQPNSDDDEDWEAIDSRIKSWFYSTCEPNLLNIITKDNCTAKDLWEA 132
           C    V+GHI G  QP +  D +W+  D  +K W Y T  P           T++++W  
Sbjct: 42  CLSFDVLGHIDGTLQPANAADVNWQKRDGIVKLWLYGTLTPKQFQGSFVFGSTSREIWLR 101

Query: 131 LDSYFLNNKLSRSLQLQTVFRNTKKGALSITDYCHTLKDIADS 3
           +++ F NNK +R+L+L    R  + G + I DYC  +K + DS
Sbjct: 102 IENQFRNNKDARALRLDNELRTKEIGDMKIADYCREMKKLPDS 144


>gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]
          Length = 820

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/103 (33%), Positives = 53/103 (51%)
 Frame = -3

Query: 311 CKGAKVMGHITGKSQPNSDDDEDWEAIDSRIKSWFYSTCEPNLLNIITKDNCTAKDLWEA 132
           C    V+GHI G  QP +  D +W+  D  +K W Y T  P           T++++W  
Sbjct: 38  CLSFDVLGHIDGTLQPANAADVNWQKRDGIVKLWLYGTLTPKQFQGSFVFGSTSREIWLR 97

Query: 131 LDSYFLNNKLSRSLQLQTVFRNTKKGALSITDYCHTLKDIADS 3
           +++ F NNK +R+L+L    R  + G + I DYC  +K + DS
Sbjct: 98  IENQFRNNKDARALRLDNELRTKEIGDMKIADYCREMKKLPDS 140


>ref|XP_002443134.1| hypothetical protein SORBIDRAFT_08g010845 [Sorghum bicolor]
           gi|241943827|gb|EES16972.1| hypothetical protein
           SORBIDRAFT_08g010845 [Sorghum bicolor]
          Length = 493

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
 Frame = -3

Query: 254 DDEDWEAIDSRIKSWFYSTCEPNLLNIITK-DNCTAKDLWEALDSYFLNNKLSRSLQLQT 78
           DD  W  +D  + SW ++T  P+LL++I +    +A+  W  L+  FLNN+ SR++ +  
Sbjct: 169 DDPTWTRMDCVVVSWIFNTISPDLLDVIHEHQGVSARGAWLGLEQQFLNNRESRAMLINA 228

Query: 77  VFRNTKKGALSITDYCHTLKDIADS 3
            FR   +GALSI DYC  +K +AD+
Sbjct: 229 EFRALSQGALSIDDYCRKMKSMADA 253


Top