BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053983
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...    56   3e-06
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...    55   8e-06
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...    55   8e-06

>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|53370655|gb|AAU89150.1| integrase core domain
           containing protein [Oryza sativa Japonica Group]
           gi|108710286|gb|ABF98081.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1322

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/43 (60%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
 Frame = +1

Query: 235 LSNDILEDVL-KKSASDFWLKLEQFCMMKSLTNKLHLKRHLYS 360
           LSNDIL++VL KK+A++ WLKLE  CM K LT+K+H+K  L+S
Sbjct: 68  LSNDILQEVLQKKTAAELWLKLESICMSKDLTSKMHIKMKLFS 110


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1278

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/43 (58%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
 Frame = +1

Query: 235 LSNDILEDVLK-KSASDFWLKLEQFCMMKSLTNKLHLKRHLYS 360
           LSNDIL++VL+ K+A++ WLKLE  CM K LT+K+H+K  L+S
Sbjct: 68  LSNDILQEVLQEKTAAELWLKLESICMSKDLTSKMHIKMKLFS 110


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
           gi|108708632|gb|ABF96427.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1326

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/43 (58%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
 Frame = +1

Query: 235 LSNDILEDVLK-KSASDFWLKLEQFCMMKSLTNKLHLKRHLYS 360
           LSNDIL++VL+ K+A++ WLKLE  CM K LT+K+H+K  L+S
Sbjct: 68  LSNDILQEVLQEKTAAELWLKLESICMSKDLTSKMHIKMKLFS 110