BLASTX nr result

ID: Atractylodes22_contig00053969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053969
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU90328.2| Pentatricopeptide repeat domain containing protei...   148   4e-34
ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat...   147   9e-34
emb|CBI21281.3| unnamed protein product [Vitis vinifera]              147   9e-34
ref|XP_003624492.1| Pentatricopeptide repeat-containing protein ...   146   2e-33
ref|XP_002303012.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32

>gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  148 bits (374), Expect = 4e-34
 Identities = 68/78 (87%), Positives = 75/78 (96%)
 Frame = +2

Query: 2   EVKIESLKYHSERLAIAFALISSPEGSPIVVMKNLRTCLDCHAAIKVISKIVGRDITVRD 181
           E+KIESLKYHSERLAIAFALI++PEGSPI++MKNLR C+DCHAAIKVISKIVGR+ITVRD
Sbjct: 742 EMKIESLKYHSERLAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVISKIVGREITVRD 801

Query: 182 SSRFHRFRDGFCSCGDYW 235
           SSRFH FRDG CSCGDYW
Sbjct: 802 SSRFHHFRDGSCSCGDYW 819


>ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  147 bits (371), Expect = 9e-34
 Identities = 67/76 (88%), Positives = 74/76 (97%)
 Frame = +2

Query: 8   KIESLKYHSERLAIAFALISSPEGSPIVVMKNLRTCLDCHAAIKVISKIVGRDITVRDSS 187
           K+ESLKYHSERLAIAFALIS+PEGSPI+VMKNLR C+DCHAAIKVISKIVGR+ITVRDS+
Sbjct: 750 KVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDST 809

Query: 188 RFHRFRDGFCSCGDYW 235
           RFH FRDGFCSCGD+W
Sbjct: 810 RFHHFRDGFCSCGDFW 825


>emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  147 bits (371), Expect = 9e-34
 Identities = 67/76 (88%), Positives = 74/76 (97%)
 Frame = +2

Query: 8   KIESLKYHSERLAIAFALISSPEGSPIVVMKNLRTCLDCHAAIKVISKIVGRDITVRDSS 187
           K+ESLKYHSERLAIAFALIS+PEGSPI+VMKNLR C+DCHAAIKVISKIVGR+ITVRDS+
Sbjct: 710 KVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDST 769

Query: 188 RFHRFRDGFCSCGDYW 235
           RFH FRDGFCSCGD+W
Sbjct: 770 RFHHFRDGFCSCGDFW 785


>ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355499507|gb|AES80710.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  146 bits (368), Expect = 2e-33
 Identities = 69/84 (82%), Positives = 76/84 (90%)
 Frame = +2

Query: 2    EVKIESLKYHSERLAIAFALISSPEGSPIVVMKNLRTCLDCHAAIKVISKIVGRDITVRD 181
            EVK+ESLKYHSER+AIAFALIS+PEGSPI+VMKNLR C DCHAAIKVISKIV R+ITVRD
Sbjct: 797  EVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVRREITVRD 856

Query: 182  SSRFHRFRDGFCSCGDYW*VFWRK 253
            SSRFH FRDGFC+C DYW  + RK
Sbjct: 857  SSRFHHFRDGFCTCRDYWVQYLRK 880


>ref|XP_002303012.1| predicted protein [Populus trichocarpa] gi|222844738|gb|EEE82285.1|
           predicted protein [Populus trichocarpa]
          Length = 815

 Score =  144 bits (362), Expect = 1e-32
 Identities = 67/78 (85%), Positives = 73/78 (93%)
 Frame = +2

Query: 2   EVKIESLKYHSERLAIAFALISSPEGSPIVVMKNLRTCLDCHAAIKVISKIVGRDITVRD 181
           E KI+SLKYHSERLAIAFALI++PEGSPI+VMKNLR C DCHAAIKVISKIVGR+ITVRD
Sbjct: 738 ESKIDSLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRD 797

Query: 182 SSRFHRFRDGFCSCGDYW 235
           S+RFH FRDG CSCGDYW
Sbjct: 798 SNRFHHFRDGSCSCGDYW 815


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