BLASTX nr result

ID: Atractylodes22_contig00053843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053843
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    61   8e-08
emb|CAN65491.1| hypothetical protein VITISV_003157 [Vitis vinifera]    57   1e-06
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    55   6e-06

>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
 Frame = -1

Query: 271  QVKRQQGLCYRCDEKYAPGHRCXXXXXXXXXXXXXXXXXXXXXXXELTN---LDRSDGVG 101
            Q +R++GL ++C+EK++PGHRC                              ++  D V 
Sbjct: 985  QARREKGLWFKCEEKFSPGHRCKKELRVLLVHEDEEEDDNQFDDRATEEPALIELKDAVE 1044

Query: 100  VSLDSVIGFSTPRTMKMEGLVGQQKAVVMVD 8
            +SL+SV+G +TP TMK++G +G ++ +++VD
Sbjct: 1045 LSLNSVVGLTTPGTMKIKGTIGSKEVIILVD 1075


>emb|CAN65491.1| hypothetical protein VITISV_003157 [Vitis vinifera]
          Length = 1242

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
 Frame = -1

Query: 271 QVKRQQGLCYRCDEKYAPGHRCXXXXXXXXXXXXXXXXXXXXXXXELTN---LDRSDGVG 101
           Q +R++G+C++CDEK++ GHRC                              ++  D + 
Sbjct: 187 QARREKGICFKCDEKFSLGHRCKKELRVLLVHEDEREEDNQFDERATMEPSLIELKDAME 246

Query: 100 VSLDSVIGFSTPRTMKMEGLVGQQKAVVMVD 8
           +SL+SV+G +TP TMK++G +G ++ + +V+
Sbjct: 247 LSLNSVVGLTTPGTMKIKGTIGSKEGLTVVE 277


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
 Frame = -1

Query: 271 QVKRQQGLCYRCDEKYAPGHRCXXXXXXXXXXXXXXXXXXXXXXXELTNLDRSDG----- 107
           Q ++++GLCYRCD+ ++ GHRC                       E++  D   G     
Sbjct: 298 QARKEKGLCYRCDKPFSKGHRC------KNRELKLCVVADDLIDTEMSEEDNDGGMVEIG 351

Query: 106 --VGVSLDSVIGFSTPRTMKMEGLVGQQKAVVMVDC 5
             V +SL SV+G + P T K++G V  ++ VVM+DC
Sbjct: 352 PIVELSLSSVVGLTAPGTSKIKGKVEDREVVVMIDC 387


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