BLASTX nr result

ID: Atractylodes22_contig00053819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053819
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002440846.1| hypothetical protein SORBIDRAFT_09g008155 [S...    47   5e-08
ref|XP_002450438.1| hypothetical protein SORBIDRAFT_05g005485 [S...    47   6e-08

>ref|XP_002440846.1| hypothetical protein SORBIDRAFT_09g008155 [Sorghum bicolor]
           gi|241946131|gb|EES19276.1| hypothetical protein
           SORBIDRAFT_09g008155 [Sorghum bicolor]
          Length = 293

 Score = 46.6 bits (109), Expect(2) = 5e-08
 Identities = 21/64 (32%), Positives = 31/64 (48%)
 Frame = +2

Query: 5   QSQQKDESKPLLDEVTFVXXXXXXXXXXXXVWVCKHCKLQFTSSYSRIHTHFFGSQPEKK 184
           Q Q   +  PL+ E+T +             W C HCK  F SS +R+  H  G+QP KK
Sbjct: 45  QVQAAGKIDPLIAEITMLGGEKGKNDGGSKHWRCNHCKKAFKSSLTRVRVHLLGAQPGKK 104

Query: 185 QKLE 196
            +++
Sbjct: 105 PQIQ 108



 Score = 35.4 bits (80), Expect(2) = 5e-08
 Identities = 19/44 (43%), Positives = 25/44 (56%)
 Frame = +1

Query: 175 GKKAEIRRCSTLLADREKYAMLLNKVKNAEKVGVSKSLKNSVIS 306
           GKK +I+RC  LL D  K   L +KVK AEK   S   K  +++
Sbjct: 102 GKKPQIQRCPVLLNDAAKTRELRDKVKEAEKSSKSVQQKGRLLN 145


>ref|XP_002450438.1| hypothetical protein SORBIDRAFT_05g005485 [Sorghum bicolor]
           gi|241936281|gb|EES09426.1| hypothetical protein
           SORBIDRAFT_05g005485 [Sorghum bicolor]
          Length = 313

 Score = 47.0 bits (110), Expect(2) = 6e-08
 Identities = 21/64 (32%), Positives = 31/64 (48%)
 Frame = +2

Query: 5   QSQQKDESKPLLDEVTFVXXXXXXXXXXXXVWVCKHCKLQFTSSYSRIHTHFFGSQPEKK 184
           Q Q   +  PL+ E+T +             W C HCK  F SS +R+  H  G+QP KK
Sbjct: 45  QVQAAGKINPLIAEITMLGGEKGKNDGGSKNWRCNHCKKAFKSSLTRVRVHLLGAQPGKK 104

Query: 185 QKLE 196
            +++
Sbjct: 105 PQIQ 108



 Score = 34.7 bits (78), Expect(2) = 6e-08
 Identities = 19/44 (43%), Positives = 25/44 (56%)
 Frame = +1

Query: 175 GKKAEIRRCSTLLADREKYAMLLNKVKNAEKVGVSKSLKNSVIS 306
           GKK +I+RC  LL D  K   L +KVK AEK   S   K  +++
Sbjct: 102 GKKPQIQRCPVLLNDAAKTWELRDKVKEAEKSSKSVQQKGRLLN 145


Top