BLASTX nr result

ID: Atractylodes22_contig00053706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053706
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327645.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
emb|CAN71843.1| hypothetical protein VITISV_036263 [Vitis vinifera]    82   3e-14
ref|XP_004146154.1| PREDICTED: F-box protein At4g35930-like [Cuc...    78   7e-13
ref|XP_002531155.1| conserved hypothetical protein [Ricinus comm...    77   2e-12
ref|XP_002869050.1| predicted protein [Arabidopsis lyrata subsp....    68   9e-10

>ref|XP_002327645.1| predicted protein [Populus trichocarpa] gi|222836730|gb|EEE75123.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 51/113 (45%), Positives = 73/113 (64%), Gaps = 12/113 (10%)
 Frame = -3

Query: 303 KEKMSKTSKQKRR-KHGSNKYLKPGALAQLRNSKASASKSCRDTGKKKVDVMDAEKT--H 133
           K+   KT KQKRR +  S++YLKPGALAQL+ SKASA+KSC D GKK+V V   +K    
Sbjct: 7   KDGNLKTPKQKRRLRSSSSRYLKPGALAQLQYSKASAAKSCTDLGKKRVAVFGNKKVGDD 66

Query: 132 GGVLFQDKCSNDIPIILSPEKF--RYNP-------VTRPVDLIKENNLQRTPK 1
             ++ +D+  +  P++LSP     +++P       +  PVDL+K+N+L RTPK
Sbjct: 67  DELVVEDRAMDKSPLLLSPVGLCKQHHPTIDKSPLMLSPVDLLKQNHLARTPK 119


>emb|CAN71843.1| hypothetical protein VITISV_036263 [Vitis vinifera]
          Length = 463

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 48/102 (47%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
 Frame = -3

Query: 303 KEKMSKTSKQKRR-KHGSNKYLKPGALAQLRNSKASASKSCRDTGKKKVDVMDAEKTHGG 127
           KE+  KT KQKRR ++ SNKYL+PGALAQLR SKA A+KSC D  KK+V V+D++K    
Sbjct: 197 KERGMKTPKQKRRQRNSSNKYLRPGALAQLRYSKA-ATKSCTDLVKKQVAVLDSKKADSD 255

Query: 126 VLFQDKCSNDIPIILSPEKFRYNPVTRPVDLIKENNLQRTPK 1
           +    +  ++   I SPEKF ++PV   +  +K+++L  TP+
Sbjct: 256 IALGGEAIDESLPIASPEKFGFSPV---IGQLKQSSLMGTPR 294


>ref|XP_004146154.1| PREDICTED: F-box protein At4g35930-like [Cucumis sativus]
           gi|449524671|ref|XP_004169345.1| PREDICTED: F-box
           protein At4g35930-like [Cucumis sativus]
          Length = 266

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
 Frame = -3

Query: 300 EKMSKTSKQKRRKHGSN-KYLKPGALAQLRNSKASASKSCRDTGKKKVDVMDAEKTHGGV 124
           ++  K  K++RR  GS  KYLKPGALA+LR SK S +KSC D G+K+V V+DA KT   V
Sbjct: 8   DREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNV 67

Query: 123 LFQDKCSNDIPIILSPEK 70
           + +DK S+  P++LSP K
Sbjct: 68  VLEDKVSDRSPLMLSPVK 85


>ref|XP_002531155.1| conserved hypothetical protein [Ricinus communis]
           gi|223529268|gb|EEF31240.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
 Frame = -3

Query: 303 KEKMSKTSKQKRR-KHGSNKYLKPGALAQLRNSKAS-ASKSCRDTGKKKVDVMDAEKTHG 130
           KE+ S+T KQKRR +  S++YLKPGALAQLR +KAS A+KSC D GKK+V V+  +K  G
Sbjct: 7   KERDSRTPKQKRRLRSSSSRYLKPGALAQLRYNKASTATKSCTDLGKKRVAVLTNKKAEG 66

Query: 129 GVLFQDKCS--NDIPIILSPEKFRYNPVTRPVDLIKENNLQRTPK 1
             +  +  S  +  P++LS           PVDL+K + L RTPK
Sbjct: 67  DDIMIENNSVIDKSPLMLS-----------PVDLLKHSYLVRTPK 100


>ref|XP_002869050.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314886|gb|EFH45309.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 301

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 43/98 (43%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
 Frame = -3

Query: 303 KEKMSKTSKQKRRKHGS-NKYLKPGALAQLRNSKASASKSCRDTGKKKVDVMDAEKTHGG 127
           K+  SKTS +K++  GS NKYLKPGAL QL  SKASA+KSC D GKK+V V D +     
Sbjct: 7   KDLDSKTSVRKKKLKGSGNKYLKPGALVQLCYSKASAAKSCNDLGKKRVPVFDTKHARNK 66

Query: 126 VLFQDKC-SNDIPIILSP-EKFRYNPVTRPVDLIKENN 19
            +  +   S   P++LSP    + + + RP+     NN
Sbjct: 67  KMAAEHLNSPKSPLMLSPVNVVKRSTLVRPMKFDDSNN 104


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