BLASTX nr result
ID: Atractylodes22_contig00053701
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00053701 (339 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAH03515.1| centromere specific histone H3 variant [Nicotian... 79 5e-13 gb|ADB03183.1| centromeric histone H3 [Hordeum marinum subsp. ma... 78 6e-13 ref|XP_002281073.1| PREDICTED: histone H3-like centromeric prote... 78 8e-13 dbj|BAH03514.1| centromere specific histone H3 variant [Nicotian... 78 8e-13 gb|AEH95351.1| centromeric histone 3 [Triticum aestivum] 77 1e-12 >dbj|BAH03515.1| centromere specific histone H3 variant [Nicotiana tabacum] gi|218744596|dbj|BAH03516.1| centromere specific histone H3 variant [Nicotiana sylvestris] Length = 157 Score = 78.6 bits (192), Expect = 5e-13 Identities = 37/51 (72%), Positives = 44/51 (86%) Frame = -2 Query: 200 RQRRHRFKPGTQALREIRRLQKTVNLLIPAAPFIRTVKEISNYIAPEVTRW 48 ++++ R++PGT ALREIRR QKT NLLIPAAPFIR VKEIS + APEVTRW Sbjct: 54 QKKKTRYRPGTVALREIRRFQKTWNLLIPAAPFIRLVKEISYFFAPEVTRW 104 >gb|ADB03183.1| centromeric histone H3 [Hordeum marinum subsp. marinum] Length = 139 Score = 78.2 bits (191), Expect = 6e-13 Identities = 33/58 (56%), Positives = 47/58 (81%) Frame = -2 Query: 221 GSSGAGERQRRHRFKPGTQALREIRRLQKTVNLLIPAAPFIRTVKEISNYIAPEVTRW 48 G+ G ++++ HRF+PGT ALREIR+ QK+V LIP APF+R +KEI+++I PE+TRW Sbjct: 48 GAPGQPKQRKPHRFRPGTVALREIRKYQKSVEFLIPFAPFVRLIKEITDFICPEITRW 105 >ref|XP_002281073.1| PREDICTED: histone H3-like centromeric protein HTR12 [Vitis vinifera] gi|297745416|emb|CBI40496.3| unnamed protein product [Vitis vinifera] Length = 156 Score = 77.8 bits (190), Expect = 8e-13 Identities = 43/103 (41%), Positives = 59/103 (57%), Gaps = 10/103 (9%) Frame = -2 Query: 326 MARTKLPAKRSTGKRKHXXXXXXXXXXXXXXRKVP----------GSSGAGERQRRHRFK 177 M RTK A++S +R+ P +G+ +++ R++ Sbjct: 1 MTRTKHLARKSRNRRRQFAATPASPASAGPSSAPPRRPTRTATDASPTGSQGQRKPFRYR 60 Query: 176 PGTQALREIRRLQKTVNLLIPAAPFIRTVKEISNYIAPEVTRW 48 PGT ALREIRR QKT +LLIPAAPFIRTV+EIS + APE++RW Sbjct: 61 PGTVALREIRRFQKTTHLLIPAAPFIRTVREISYFFAPEISRW 103 >dbj|BAH03514.1| centromere specific histone H3 variant [Nicotiana tabacum] gi|218744598|dbj|BAH03517.1| centromere specific histone H3 variant [Nicotiana tomentosiformis] Length = 156 Score = 77.8 bits (190), Expect = 8e-13 Identities = 36/51 (70%), Positives = 45/51 (88%) Frame = -2 Query: 200 RQRRHRFKPGTQALREIRRLQKTVNLLIPAAPFIRTVKEISNYIAPEVTRW 48 ++++ R++PGT ALREIRR QKT +LLIPAAPFIR VKEIS++ APEVTRW Sbjct: 53 QKKKTRYRPGTVALREIRRFQKTWDLLIPAAPFIRLVKEISHFFAPEVTRW 103 >gb|AEH95351.1| centromeric histone 3 [Triticum aestivum] Length = 163 Score = 77.0 bits (188), Expect = 1e-12 Identities = 31/58 (53%), Positives = 48/58 (82%) Frame = -2 Query: 221 GSSGAGERQRRHRFKPGTQALREIRRLQKTVNLLIPAAPFIRTVKEISNYIAPEVTRW 48 G++G ++++ HRF+PGT ALREIRR QK+V+ LIP APF+R +KE++++ PE++RW Sbjct: 54 GATGQPKQRKPHRFRPGTVALREIRRYQKSVDFLIPFAPFVRLIKEVTDFFCPEISRW 111