BLASTX nr result

ID: Atractylodes22_contig00053699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053699
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     158   4e-37
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               156   2e-36
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                156   2e-36
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   155   3e-36
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        154   7e-36

>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/102 (73%), Positives = 87/102 (85%)
 Frame = -3

Query: 306  SLMYAMICMCPDLSYAVSMVSRYMENLGKEHWKAVLWIFCYLRGTSSLCLHFGKTDDGVL 127
            SLMYAM+C  PDLS+A+S+VSRYM N GKEHWKAV WIF YLRGTSS CL FG++ DG++
Sbjct: 1031 SLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSSDGLV 1090

Query: 126  GYVDSDHANDLDKDKQRSLTGYVFTLGGCAISWKAQLQCTVA 1
            GYVDSD A DL  D++RSLTGYVFT+GGCA+SWKA LQ TVA
Sbjct: 1091 GYVDSDFAGDL--DRRRSLTGYVFTVGGCAVSWKASLQATVA 1130


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  156 bits (394), Expect = 2e-36
 Identities = 75/102 (73%), Positives = 86/102 (84%)
 Frame = -3

Query: 306  SLMYAMICMCPDLSYAVSMVSRYMENLGKEHWKAVLWIFCYLRGTSSLCLHFGKTDDGVL 127
            SLMYAMIC  PDLS+A+S+VSRYM N GKEHWKAV WIF YL GTSS CL FG++ DG++
Sbjct: 860  SLMYAMICSRPDLSHALSVVSRYMVNPGKEHWKAVQWIFRYLHGTSSACLQFGRSRDGLV 919

Query: 126  GYVDSDHANDLDKDKQRSLTGYVFTLGGCAISWKAQLQCTVA 1
            GYVDSD A DL  D++RSLTGYVFT+GGCA+SWKA LQ TVA
Sbjct: 920  GYVDSDFAGDL--DRRRSLTGYVFTIGGCAVSWKASLQATVA 959


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  156 bits (394), Expect = 2e-36
 Identities = 75/102 (73%), Positives = 86/102 (84%)
 Frame = -3

Query: 306  SLMYAMICMCPDLSYAVSMVSRYMENLGKEHWKAVLWIFCYLRGTSSLCLHFGKTDDGVL 127
            SLMYAMIC  PDLS+A+S+VSRYM N GKEHWKAV WIF YL GTSS CL FG++ DG++
Sbjct: 1028 SLMYAMICSRPDLSHALSVVSRYMVNPGKEHWKAVQWIFRYLHGTSSACLQFGRSRDGLV 1087

Query: 126  GYVDSDHANDLDKDKQRSLTGYVFTLGGCAISWKAQLQCTVA 1
            GYVDSD A DL  D++RSLTGYVFT+GGCA+SWKA LQ TVA
Sbjct: 1088 GYVDSDFAGDL--DRRRSLTGYVFTIGGCAVSWKASLQATVA 1127


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  155 bits (392), Expect = 3e-36
 Identities = 74/102 (72%), Positives = 85/102 (83%)
 Frame = -3

Query: 306  SLMYAMICMCPDLSYAVSMVSRYMENLGKEHWKAVLWIFCYLRGTSSLCLHFGKTDDGVL 127
            SLMYAM+C  PDLS+A+S+VSRYM N GKEHWKAV WIF YLRGTSS CL FG++ DG++
Sbjct: 1329 SLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSRDGLV 1388

Query: 126  GYVDSDHANDLDKDKQRSLTGYVFTLGGCAISWKAQLQCTVA 1
            GYVDSD A DLD+   RSL GYVFT+GGCA+SWKA LQ TVA
Sbjct: 1389 GYVDSDFAGDLDRG--RSLAGYVFTIGGCAVSWKASLQATVA 1428


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  154 bits (389), Expect = 7e-36
 Identities = 74/102 (72%), Positives = 85/102 (83%)
 Frame = -3

Query: 306  SLMYAMICMCPDLSYAVSMVSRYMENLGKEHWKAVLWIFCYLRGTSSLCLHFGKTDDGVL 127
            SLMYAMIC  PDLS+A+S+VSRYM N GKEHWK V WIF YL GTSS CL FG++ DG++
Sbjct: 971  SLMYAMICSRPDLSHALSVVSRYMANPGKEHWKDVQWIFRYLHGTSSACLQFGRSRDGLV 1030

Query: 126  GYVDSDHANDLDKDKQRSLTGYVFTLGGCAISWKAQLQCTVA 1
            GYVDSD A DL  D++RSLTGYVFT+GGCA+SWKA LQ TVA
Sbjct: 1031 GYVDSDFAGDL--DRRRSLTGYVFTIGGCAVSWKASLQATVA 1070


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